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The map label for this gene is 28572417

Identifier: 28572417

GI number: 28572417

Start: 288036

End: 288500

Strand: Reverse

Name: 28572417

Synonym: TW258

Alternate gene names: NA

Gene position: 288500-288036 (Counterclockwise)

Preceding gene: 28572418

Following gene: 28572405

Centisome position: 31.16

GC content: 46.45

Gene sequence:

>465_bases
ATGGGAGTTTCCTGCAAAACCGTGTGTGCCTTTATTGTTAGCTCTGCGCTTTTTGGCTGCAGCACGGCTATTGTGCTTGA
ACCCGCACAAAGTGCGAATAACCCGAATTGTGCAGCTGTTACAGTAAGACTTCCGCAAGTACTGGGAAATCTGGTAAGCA
GAAAAACAACTGCCCAGGCAACAGCTGCATGGGGAGAACCATTGGGAGCCGTGTTGCGTTGCGGACTTCCTGTGCAAAAG
CCGACAACTGAATTGTGTGTCAGTGTAAACAATGTTGACTGGGTAATAAATGACAAATTTAATACAAATATTCATGGGGT
AAAGTTCAATGTAAGAGCCGTTACCTACGGGCGATCGCCGGCAGCTGAGGTGTTTTTGGACAATTTTAAAATATCACCAG
CAACAGCACTGGCAACACTTGGGTTGGCGGTAAATTACCTGCCAAAAGTGGCTTCATGCAGTTGA

Upstream 100 bases:

>100_bases
TTGATGGCGCGGATGCTGCTAGGTTTTTAGGATACATAAAATCCCTGCTTGAAACGGGAAATTGTACAGTTTAGCGTGCA
ATGGATTTAAGGTTGCTACG

Downstream 100 bases:

>100_bases
TGCAAGTCTCAGTTTAGCGTTTGACCTGGCAGTAGGCTGAGGCAAGAATAGTCTCTATAACTTGACTGTATTGCATCGAC
TTAAAGCTTGATGGAAAAAT

Product: lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGVSCKTVCAFIVSSALFGCSTAIVLEPAQSANNPNCAAVTVRLPQVLGNLVSRKTTAQATAAWGEPLGAVLRCGLPVQK
PTTELCVSVNNVDWVINDKFNTNIHGVKFNVRAVTYGRSPAAEVFLDNFKISPATALATLGLAVNYLPKVASCS

Sequences:

>Translated_154_residues
MGVSCKTVCAFIVSSALFGCSTAIVLEPAQSANNPNCAAVTVRLPQVLGNLVSRKTTAQATAAWGEPLGAVLRCGLPVQK
PTTELCVSVNNVDWVINDKFNTNIHGVKFNVRAVTYGRSPAAEVFLDNFKISPATALATLGLAVNYLPKVASCS
>Mature_153_residues
GVSCKTVCAFIVSSALFGCSTAIVLEPAQSANNPNCAAVTVRLPQVLGNLVSRKTTAQATAAWGEPLGAVLRCGLPVQKP
TTELCVSVNNVDWVINDKFNTNIHGVKFNVRAVTYGRSPAAEVFLDNFKISPATALATLGLAVNYLPKVASCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16125; Mature: 15994

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSCKTVCAFIVSSALFGCSTAIVLEPAQSANNPNCAAVTVRLPQVLGNLVSRKTTAQA
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHCCCHHHHH
TAAWGEPLGAVLRCGLPVQKPTTELCVSVNNVDWVINDKFNTNIHGVKFNVRAVTYGRSP
HHHCCCHHHHHHHCCCCCCCCCHHHEEEECCEEEEEECCCCCCEEEEEEEEEEEEECCCC
AAEVFLDNFKISPATALATLGLAVNYLPKVASCS
HHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GVSCKTVCAFIVSSALFGCSTAIVLEPAQSANNPNCAAVTVRLPQVLGNLVSRKTTAQA
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHCCCHHHHH
TAAWGEPLGAVLRCGLPVQKPTTELCVSVNNVDWVINDKFNTNIHGVKFNVRAVTYGRSP
HHHCCCHHHHHHHCCCCCCCCCHHHEEEECCEEEEEECCCCCCEEEEEEEEEEEEECCCC
AAEVFLDNFKISPATALATLGLAVNYLPKVASCS
HHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA