Click here to switch to the map view.

The map label for this gene is 28572405

Identifier: 28572405

GI number: 28572405

Start: 273875

End: 275149

Strand: Reverse

Name: 28572405

Synonym: TW246

Alternate gene names: NA

Gene position: 275149-273875 (Counterclockwise)

Preceding gene: 28572417

Following gene: 28572403

Centisome position: 29.72

GC content: 46.43

Gene sequence:

>1275_bases
ATGATACACGAGGATGATGGCAACGAGGGCCTTCCACCGTGGATGCAAGGAGGTATCTTTCTTCCAAACATTATAGGACC
GGTAAAGAATCCTGAACTTCAGGTCCTACGTCAGGCAGAGCAAGTGATAAACACAGTGCCGAAAGTGCAGATAGATAGCG
ACACAAGAGAGCGGCTGATAAAAAACATTGATGTAGCGAACCTATGGCTCTCAGAAGCTAGTTCTTTGACAGAAGTGAAA
GTACCGTGTGAAATCCTCACCAGGGATGAATGGGTAAGGAATACTGCGCGCGGATGGCTAGACCTGACTTCGCCGATTAG
TTCAGTTATTGCATCGAAACTCATTCAGCAGGCACAACATAATCTTCCAGAATCCCTCAAGCCACTCATCTCTCAACTTT
CTCAGGCAATGCAGCAGGTTAGTAAAGCATCGCTACTTGTACAAGTTGGCAATGCAGCAGGCAATTTATCTTTAGAGGTT
TTGTCTGGATGTGATGTTGGGATTCCGCTTCTCGAATCCCCAAAGGCCCTCATCGTTGCGGAGAATGTCGTAAAGTTTGC
AAGCGACTTTCATCTACCCCTTGATGAAGCCGGGATTTATCTTGCATGCAGAGAGATTGCATACGCATGTATTTTACAAC
ACTGCGCCTGGATAAAGAGTAGGATATTTACCTCAATTCACAGCTTTTCGAAAAGTATGAGCGTTGATAACGAACTGATG
GACATAAATGACATGCACTTCGATGCGGCAAGCGCACTGACGCAGATTACGGGAACAATAAAGTTCGAGCCAAATGAACA
ACAATTAAATGCGCTGCGCGTGCTTGAGGATCAGTTAGCAATTCTTGAGGGATGGGTTAGCATTGTTACCACGATCGCAA
CTTCCCGACTGCCGCACGCTGGGGCAATAAATGAAACAATTGTCCGGAGAAGAGCTGGCGGCGGGCCGGCCGAGAAGGCT
TTATCCTCCCTGATAGGGATCGACCTTCATCCACGTAGGCTACGCGCAAGCCAAAGCATGTGGAACAAGATAACACAAAC
TGTTGGGCCTTATAAGCGGGATAGTCTTTGGGGGCATCCCGACCTTGTGCCTACGTCTCATGATATTGACGATCCTGAGG
GTCTGATCAAGAGACTTAGCGAGAATAAGAGTGACAAGATTGATGATGAACTTTCAAGACTGCTTGACTCAGAAATAGAA
CGAAATGTCAAAAATAGCACAGGTGACGATGAAGGTGATACAAATAGCAACGGAAAGGACGCAAGTAAAAGCTAA

Upstream 100 bases:

>100_bases
TTGAATGAAATTACACCCTTTGAATAAGAGAAATAGGGTGCTGGGAGGCTATTGCCGTTTCAGGTAGAATCATCATGATT
TCAGGTAGAATCATCATGAA

Downstream 100 bases:

>100_bases
TCAAGGCACATAGCGCATATAAATTCAGGCATGCATGCCTATTCCTTGGCAGATATAGGTGATAAGCACAATTCAGTTAA
ATACCTACTGGGAGTGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MIHEDDGNEGLPPWMQGGIFLPNIIGPVKNPELQVLRQAEQVINTVPKVQIDSDTRERLIKNIDVANLWLSEASSLTEVK
VPCEILTRDEWVRNTARGWLDLTSPISSVIASKLIQQAQHNLPESLKPLISQLSQAMQQVSKASLLVQVGNAAGNLSLEV
LSGCDVGIPLLESPKALIVAENVVKFASDFHLPLDEAGIYLACREIAYACILQHCAWIKSRIFTSIHSFSKSMSVDNELM
DINDMHFDAASALTQITGTIKFEPNEQQLNALRVLEDQLAILEGWVSIVTTIATSRLPHAGAINETIVRRRAGGGPAEKA
LSSLIGIDLHPRRLRASQSMWNKITQTVGPYKRDSLWGHPDLVPTSHDIDDPEGLIKRLSENKSDKIDDELSRLLDSEIE
RNVKNSTGDDEGDTNSNGKDASKS

Sequences:

>Translated_424_residues
MIHEDDGNEGLPPWMQGGIFLPNIIGPVKNPELQVLRQAEQVINTVPKVQIDSDTRERLIKNIDVANLWLSEASSLTEVK
VPCEILTRDEWVRNTARGWLDLTSPISSVIASKLIQQAQHNLPESLKPLISQLSQAMQQVSKASLLVQVGNAAGNLSLEV
LSGCDVGIPLLESPKALIVAENVVKFASDFHLPLDEAGIYLACREIAYACILQHCAWIKSRIFTSIHSFSKSMSVDNELM
DINDMHFDAASALTQITGTIKFEPNEQQLNALRVLEDQLAILEGWVSIVTTIATSRLPHAGAINETIVRRRAGGGPAEKA
LSSLIGIDLHPRRLRASQSMWNKITQTVGPYKRDSLWGHPDLVPTSHDIDDPEGLIKRLSENKSDKIDDELSRLLDSEIE
RNVKNSTGDDEGDTNSNGKDASKS
>Mature_424_residues
MIHEDDGNEGLPPWMQGGIFLPNIIGPVKNPELQVLRQAEQVINTVPKVQIDSDTRERLIKNIDVANLWLSEASSLTEVK
VPCEILTRDEWVRNTARGWLDLTSPISSVIASKLIQQAQHNLPESLKPLISQLSQAMQQVSKASLLVQVGNAAGNLSLEV
LSGCDVGIPLLESPKALIVAENVVKFASDFHLPLDEAGIYLACREIAYACILQHCAWIKSRIFTSIHSFSKSMSVDNELM
DINDMHFDAASALTQITGTIKFEPNEQQLNALRVLEDQLAILEGWVSIVTTIATSRLPHAGAINETIVRRRAGGGPAEKA
LSSLIGIDLHPRRLRASQSMWNKITQTVGPYKRDSLWGHPDLVPTSHDIDDPEGLIKRLSENKSDKIDDELSRLLDSEIE
RNVKNSTGDDEGDTNSNGKDASKS

Specific function: Unknown

COG id: COG5282

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46660; Mature: 46660

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHEDDGNEGLPPWMQGGIFLPNIIGPVKNPELQVLRQAEQVINTVPKVQIDSDTRERLI
CCCCCCCCCCCCHHHHCCEECCHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHH
KNIDVANLWLSEASSLTEVKVPCEILTRDEWVRNTARGWLDLTSPISSVIASKLIQQAQH
HHCCHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLPESLKPLISQLSQAMQQVSKASLLVQVGNAAGNLSLEVLSGCDVGIPLLESPKALIVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCEEHH
ENVVKFASDFHLPLDEAGIYLACREIAYACILQHCAWIKSRIFTSIHSFSKSMSVDNELM
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DINDMHFDAASALTQITGTIKFEPNEQQLNALRVLEDQLAILEGWVSIVTTIATSRLPHA
CCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAINETIVRRRAGGGPAEKALSSLIGIDLHPRRLRASQSMWNKITQTVGPYKRDSLWGHP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLVPTSHDIDDPEGLIKRLSENKSDKIDDELSRLLDSEIERNVKNSTGDDEGDTNSNGKD
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASKS
CCCC
>Mature Secondary Structure
MIHEDDGNEGLPPWMQGGIFLPNIIGPVKNPELQVLRQAEQVINTVPKVQIDSDTRERLI
CCCCCCCCCCCCHHHHCCEECCHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHH
KNIDVANLWLSEASSLTEVKVPCEILTRDEWVRNTARGWLDLTSPISSVIASKLIQQAQH
HHCCHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLPESLKPLISQLSQAMQQVSKASLLVQVGNAAGNLSLEVLSGCDVGIPLLESPKALIVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCEEHH
ENVVKFASDFHLPLDEAGIYLACREIAYACILQHCAWIKSRIFTSIHSFSKSMSVDNELM
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DINDMHFDAASALTQITGTIKFEPNEQQLNALRVLEDQLAILEGWVSIVTTIATSRLPHA
CCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAINETIVRRRAGGGPAEKALSSLIGIDLHPRRLRASQSMWNKITQTVGPYKRDSLWGHP
CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLVPTSHDIDDPEGLIKRLSENKSDKIDDELSRLLDSEIERNVKNSTGDDEGDTNSNGKD
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASKS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA