Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572403

Identifier: 28572403

GI number: 28572403

Start: 270823

End: 271998

Strand: Reverse

Name: 28572403

Synonym: TW244

Alternate gene names: NA

Gene position: 271998-270823 (Counterclockwise)

Preceding gene: 28572405

Following gene: 28572400

Centisome position: 29.38

GC content: 43.45

Gene sequence:

>1176_bases
ATGATTGCGCTCTCACCAATGTCAATGGCCGCTGTGGCTGTTGCGACTTTACCAAACCTGAATGTACTACAGGTTGCCAG
GGGCACCTCTGATTCACACCACGTAGACTCCATACTACGTTGTGATGATAATCGCTGGATGTTAATAAGGGTGCCACTCT
CGCAGAATGCGAAAGATAAAATGGCCAGACTTGTGAAAAATTTGAGAGCACTTAGTAAGGGTGTCAGAGCGCGCTTGCCA
TTTTCGATACCGAATGTTCTGGCCTATCAGCCTGTCAAACTGTCTTCGGGGATGAATATGACTCTCATTATGGATCACCC
ACAAGGCTATGCATTGAGAGATATAAAGCCTGGTGAAGGTGCTGCGACTTCGATTGGCTGGGCAATAGCAGCGATTCATA
ATCTGCCGAGCGGTCTTCTAATATCTGCTGGGTACACACACAAAACAGCTCAGGATTGCCGTTACGAAGTTATAGATTTT
GTTGATAAGGCAAATGCAACGAATATGTTGCCAGGGTCCCTCAAAGAAAAATGGGAGACCCTGGTAGAAGATGAAGACCT
GTGGAAATTTCAAACTACAGTCGTTAAAAAAAATTTCTCGATGGATTCATTTCGCTTTCAAGATAATCAGGAGGGCGAAA
GCTCGGTATGCGCAATCCTGGAATGGGAAGATGCATCTATTGATGACCCTGCCTATGATTTGCATTGGCTTAATCAACTG
TCTCATGAAAGTGCAGAAAGCATACTAAAGGCATATGAAGCCTTTAGTACAACCACTCATGATAGAGGCTGCCTGGAGCG
TGCAAAGCTGTATGCAGAGCTTGATATAGCACGCATTCTAATCGATGGAGTTAGAGAAGAAAAGCATGAACTCATTGATA
TGGCAAAGCGTCTTCTCTTGGAATTGGATCGCACAAGTGCGCAAGAAGATACTCCTAAACAAGCCATACACAAGGCTGAA
GGTCTGCTTGAGAATGCGCAGAATCTGTCATTTGAACAACAAAGGTCATATGAAATACAGTCTGATGACGTAAATGCATA
TTCTGACGAAGAGACATACAAAAGCGATCAGGTGTCAGATAGTGGGATATCTGAGAATCTTCGGAATATTGAAGAATTCC
TTGGCAGTGCAAAAACAAACACTGAAGAGGAAAATAGTGAAGCAAAAAATGAATAG

Upstream 100 bases:

>100_bases
GAAAAAACATCAATTGTCAATTATTTCCCATCAAAAACATTGCCAATATTTGCGTGGCTGCGCCCTCAATTCACAAAAAA
GTCTTAGCCTTTTAAGGGTC

Downstream 100 bases:

>100_bases
TTTAAACATCACCATGGCTTTTTCTATGAGAAAAGGTCAGACAGAAATCCCGGCATCTTACCAAGCTCATCAACAGTGTA
TGGCCTAACCTTGATGGTTC

Product: transferase

Products: NA

Alternate protein names: Phosphotransferase; Macrolide 2-Phosphotransferase; Macrolide 2-Phosphotransferase-Like Protein; Macrolide Phosphotransferase; Aminoglycoside Phosphotransferase-Like Protein; Phosphotransferase Family Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MIALSPMSMAAVAVATLPNLNVLQVARGTSDSHHVDSILRCDDNRWMLIRVPLSQNAKDKMARLVKNLRALSKGVRARLP
FSIPNVLAYQPVKLSSGMNMTLIMDHPQGYALRDIKPGEGAATSIGWAIAAIHNLPSGLLISAGYTHKTAQDCRYEVIDF
VDKANATNMLPGSLKEKWETLVEDEDLWKFQTTVVKKNFSMDSFRFQDNQEGESSVCAILEWEDASIDDPAYDLHWLNQL
SHESAESILKAYEAFSTTTHDRGCLERAKLYAELDIARILIDGVREEKHELIDMAKRLLLELDRTSAQEDTPKQAIHKAE
GLLENAQNLSFEQQRSYEIQSDDVNAYSDEETYKSDQVSDSGISENLRNIEEFLGSAKTNTEEENSEAKNE

Sequences:

>Translated_391_residues
MIALSPMSMAAVAVATLPNLNVLQVARGTSDSHHVDSILRCDDNRWMLIRVPLSQNAKDKMARLVKNLRALSKGVRARLP
FSIPNVLAYQPVKLSSGMNMTLIMDHPQGYALRDIKPGEGAATSIGWAIAAIHNLPSGLLISAGYTHKTAQDCRYEVIDF
VDKANATNMLPGSLKEKWETLVEDEDLWKFQTTVVKKNFSMDSFRFQDNQEGESSVCAILEWEDASIDDPAYDLHWLNQL
SHESAESILKAYEAFSTTTHDRGCLERAKLYAELDIARILIDGVREEKHELIDMAKRLLLELDRTSAQEDTPKQAIHKAE
GLLENAQNLSFEQQRSYEIQSDDVNAYSDEETYKSDQVSDSGISENLRNIEEFLGSAKTNTEEENSEAKNE
>Mature_391_residues
MIALSPMSMAAVAVATLPNLNVLQVARGTSDSHHVDSILRCDDNRWMLIRVPLSQNAKDKMARLVKNLRALSKGVRARLP
FSIPNVLAYQPVKLSSGMNMTLIMDHPQGYALRDIKPGEGAATSIGWAIAAIHNLPSGLLISAGYTHKTAQDCRYEVIDF
VDKANATNMLPGSLKEKWETLVEDEDLWKFQTTVVKKNFSMDSFRFQDNQEGESSVCAILEWEDASIDDPAYDLHWLNQL
SHESAESILKAYEAFSTTTHDRGCLERAKLYAELDIARILIDGVREEKHELIDMAKRLLLELDRTSAQEDTPKQAIHKAE
GLLENAQNLSFEQQRSYEIQSDDVNAYSDEETYKSDQVSDSGISENLRNIEEFLGSAKTNTEEENSEAKNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43853; Mature: 43853

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALSPMSMAAVAVATLPNLNVLQVARGTSDSHHVDSILRCDDNRWMLIRVPLSQNAKDK
CEECCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHH
MARLVKNLRALSKGVRARLPFSIPNVLAYQPVKLSSGMNMTLIMDHPQGYALRDIKPGEG
HHHHHHHHHHHHHHHHEECCCCCCCHHEECCEEECCCCCEEEEEECCCCCEECCCCCCCC
AATSIGWAIAAIHNLPSGLLISAGYTHKTAQDCRYEVIDFVDKANATNMLPGSLKEKWET
CHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LVEDEDLWKFQTTVVKKNFSMDSFRFQDNQEGESSVCAILEWEDASIDDPAYDLHWLNQL
HHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
SHESAESILKAYEAFSTTTHDRGCLERAKLYAELDIARILIDGVREEKHELIDMAKRLLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDRTSAQEDTPKQAIHKAEGLLENAQNLSFEQQRSYEIQSDDVNAYSDEETYKSDQVSD
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
SGISENLRNIEEFLGSAKTNTEEENSEAKNE
CCHHHHHHHHHHHHCCCCCCCCHHCHHCCCC
>Mature Secondary Structure
MIALSPMSMAAVAVATLPNLNVLQVARGTSDSHHVDSILRCDDNRWMLIRVPLSQNAKDK
CEECCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHH
MARLVKNLRALSKGVRARLPFSIPNVLAYQPVKLSSGMNMTLIMDHPQGYALRDIKPGEG
HHHHHHHHHHHHHHHHEECCCCCCCHHEECCEEECCCCCEEEEEECCCCCEECCCCCCCC
AATSIGWAIAAIHNLPSGLLISAGYTHKTAQDCRYEVIDFVDKANATNMLPGSLKEKWET
CHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LVEDEDLWKFQTTVVKKNFSMDSFRFQDNQEGESSVCAILEWEDASIDDPAYDLHWLNQL
HHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
SHESAESILKAYEAFSTTTHDRGCLERAKLYAELDIARILIDGVREEKHELIDMAKRLLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDRTSAQEDTPKQAIHKAEGLLENAQNLSFEQQRSYEIQSDDVNAYSDEETYKSDQVSD
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
SGISENLRNIEEFLGSAKTNTEEENSEAKNE
CCHHHHHHHHHHHHCCCCCCCCHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA