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The map label for this gene is yfhI [H]

Identifier: 28572263

GI number: 28572263

Start: 95602

End: 96681

Strand: Direct

Name: yfhI [H]

Synonym: TW096

Alternate gene names: 28572263

Gene position: 95602-96681 (Clockwise)

Preceding gene: 28572261

Following gene: 28572265

Centisome position: 10.32

GC content: 42.69

Gene sequence:

>1080_bases
ATGATCCCCGCTTCAGCCATAAAGTATATGGCTGAAGATCTGAATGTTAGCCTCGGAAAAATTGGGTTTTTGATAACATT
GTTTTCCTTTGCTGTAATTCTGACAGCCCCCATTCTTACTATTATTACTAGGGGCATAAGTCGCAGATCTCTTATGACTA
CAGTCATTATTTTTCTGGGCCTCTTTCATGCAAGCGCTGCGCTTTTTACCGGATATGAGATGGTGGCAGTGGTTCGCTTT
CTGACAGGTGCTGTTCACGGTATGTTTTGGACACTTGTCGGAAGTATAGTTGGCCAGCTATACGCGCCACGCAGTCTCGC
AAGAGCAATGTCGATTGTTCTTGGAGGTGGCACTGTTTCTTATGTTATTGGCCTTCCGTTGTCAAACTTTTTTGCATTTC
AGTTTGGCTGGAAGTCAGTGGTGATTGTCCTGGGTATTATGTTTGTTCTATTGGGCTTGTTATTCAACTTTACGCTGAAA
GTTCCCCTACATTCGGCCAGAATGGGTCCTGCCAAAAATAGGAATGTTTTTAAAAGTAAATGGATGCCGATTTGTATTTT
GAGCGCCTCAGTTTTACTTGGGCAGTTTATTTTTTCAAGTTATGTTCCTGCGTTTTTGTCAAAGCGATATTCGCCAGAGT
TTGTTAGTATTCTCCTATTTGTATACGGATTTTGTGGATGTATTGGCAATGTTCTGGCAGGTGTTTTTAAACCCACTCGT
AGGCGATTTATGGTTATCATCGCTACATCATTGATTTGTATTTTGCTTTTCTCGTTTATGGATAACGCAATTGGGCTCGC
TGCGTATGCTATTTGGGGTGCCATGTTTGGTGCAGTCCCGGTATTGTTGACTGTCTTTTTGCTGAGTAATACAAGCGATA
ATAATCGTGATATCGCCAACGCTTATTACACTATGAGTTTCAACATCGGGATAGGTTCGGGTGCACTATTCGGCGGGCTT
TTTCTCGATGGATTTGGGTTTTATGTGCTTCCACTTGCGTCTTGTGCCGCATTACTGTTGAGTTTTCTGTTATCACTGAG
AACTGTTTCAGGGCGCCATAATCCTGCTGATACCGGCTGA

Upstream 100 bases:

>100_bases
TTTTTATTCATTGACTTCATACTCGCTTAAACGAGGATAGACGATTTTGCTGTTGTTGATTGTTTTGTCCGCAGGGGTTT
TTCTGTCGGTAGTCGGAGAA

Downstream 100 bases:

>100_bases
ATAACCGCAATTAAATTTTCTTTACAAACTGCACACACCGGGCCGTTTGAGTCGATTCCAAGAGATATATATCGCCCGCA
ACTTAGGTCATCTGCCTGTT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MIPASAIKYMAEDLNVSLGKIGFLITLFSFAVILTAPILTIITRGISRRSLMTTVIIFLGLFHASAALFTGYEMVAVVRF
LTGAVHGMFWTLVGSIVGQLYAPRSLARAMSIVLGGGTVSYVIGLPLSNFFAFQFGWKSVVIVLGIMFVLLGLLFNFTLK
VPLHSARMGPAKNRNVFKSKWMPICILSASVLLGQFIFSSYVPAFLSKRYSPEFVSILLFVYGFCGCIGNVLAGVFKPTR
RRFMVIIATSLICILLFSFMDNAIGLAAYAIWGAMFGAVPVLLTVFLLSNTSDNNRDIANAYYTMSFNIGIGSGALFGGL
FLDGFGFYVLPLASCAALLLSFLLSLRTVSGRHNPADTG

Sequences:

>Translated_359_residues
MIPASAIKYMAEDLNVSLGKIGFLITLFSFAVILTAPILTIITRGISRRSLMTTVIIFLGLFHASAALFTGYEMVAVVRF
LTGAVHGMFWTLVGSIVGQLYAPRSLARAMSIVLGGGTVSYVIGLPLSNFFAFQFGWKSVVIVLGIMFVLLGLLFNFTLK
VPLHSARMGPAKNRNVFKSKWMPICILSASVLLGQFIFSSYVPAFLSKRYSPEFVSILLFVYGFCGCIGNVLAGVFKPTR
RRFMVIIATSLICILLFSFMDNAIGLAAYAIWGAMFGAVPVLLTVFLLSNTSDNNRDIANAYYTMSFNIGIGSGALFGGL
FLDGFGFYVLPLASCAALLLSFLLSLRTVSGRHNPADTG
>Mature_359_residues
MIPASAIKYMAEDLNVSLGKIGFLITLFSFAVILTAPILTIITRGISRRSLMTTVIIFLGLFHASAALFTGYEMVAVVRF
LTGAVHGMFWTLVGSIVGQLYAPRSLARAMSIVLGGGTVSYVIGLPLSNFFAFQFGWKSVVIVLGIMFVLLGLLFNFTLK
VPLHSARMGPAKNRNVFKSKWMPICILSASVLLGQFIFSSYVPAFLSKRYSPEFVSILLFVYGFCGCIGNVLAGVFKPTR
RRFMVIIATSLICILLFSFMDNAIGLAAYAIWGAMFGAVPVLLTVFLLSNTSDNNRDIANAYYTMSFNIGIGSGALFGGL
FLDGFGFYVLPLASCAALLLSFLLSLRTVSGRHNPADTG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI145693198, Length=366, Percent_Identity=23.224043715847, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786595, Length=366, Percent_Identity=23.224043715847, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787808, Length=336, Percent_Identity=23.5119047619048, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 38868; Mature: 38868

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPASAIKYMAEDLNVSLGKIGFLITLFSFAVILTAPILTIITRGISRRSLMTTVIIFLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFHASAALFTGYEMVAVVRFLTGAVHGMFWTLVGSIVGQLYAPRSLARAMSIVLGGGTVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE
YVIGLPLSNFFAFQFGWKSVVIVLGIMFVLLGLLFNFTLKVPLHSARMGPAKNRNVFKSK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHC
WMPICILSASVLLGQFIFSSYVPAFLSKRYSPEFVSILLFVYGFCGCIGNVLAGVFKPTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFMVIIATSLICILLFSFMDNAIGLAAYAIWGAMFGAVPVLLTVFLLSNTSDNNRDIAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AYYTMSFNIGIGSGALFGGLFLDGFGFYVLPLASCAALLLSFLLSLRTVSGRHNPADTG
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIPASAIKYMAEDLNVSLGKIGFLITLFSFAVILTAPILTIITRGISRRSLMTTVIIFLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFHASAALFTGYEMVAVVRFLTGAVHGMFWTLVGSIVGQLYAPRSLARAMSIVLGGGTVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE
YVIGLPLSNFFAFQFGWKSVVIVLGIMFVLLGLLFNFTLKVPLHSARMGPAKNRNVFKSK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHC
WMPICILSASVLLGQFIFSSYVPAFLSKRYSPEFVSILLFVYGFCGCIGNVLAGVFKPTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFMVIIATSLICILLFSFMDNAIGLAAYAIWGAMFGAVPVLLTVFLLSNTSDNNRDIAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AYYTMSFNIGIGSGALFGGLFLDGFGFYVLPLASCAALLLSFLLSLRTVSGRHNPADTG
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]