The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572262

Identifier: 28572262

GI number: 28572262

Start: 95180

End: 95521

Strand: Reverse

Name: 28572262

Synonym: TW095

Alternate gene names: NA

Gene position: 95521-95180 (Counterclockwise)

Preceding gene: 28572264

Following gene: 28572251

Centisome position: 10.32

GC content: 42.98

Gene sequence:

>342_bases
ATGAAGTCAATGAATAAAAAACTTGCAGTATTTCTGCTAGCACGAGATCTGAGTTTTGTTCTGTCTGCGACAATCCTTGA
AGTTTGGTGTTTATCCTCAGTCACCTGGCCCGTGAACGCAATATTTGGTGTTGTACTGCCGATTGTCCTGGGTCTGGGGT
GGGCGTGTATCTTATCGACATCTCCAGCAATTTCAGCAAGTATATACCTTCGCTCAATCGTGTATCTCGTGGTTTCACTG
CTTGCAGCTCTAAGTCTAATAGATTTTCGGTCTATTGGTCTTGCCGTTGCACATCTTGTATTAGCATCGTTTATCGGTTT
TGTGCTTGTCTTGCTTGATTAA

Upstream 100 bases:

>100_bases
ATGGCTGAAGCGGGGATCATTTCTCCGACTACCGACAGAAAAACCCCTGCGGACAAAACAATCAACAACAGCAAAATCGT
CTATCCTCGTTTAAGCGAGT

Downstream 100 bases:

>100_bases
GCTACTAAATAAGGGGCACGTTGCATGTTTTTGTCTTCAGAAATGGTCCAGAGAAACACTGTGGGGCAAAACATTCAATG
CGCAAAATGCCTCTTGCCGG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKSMNKKLAVFLLARDLSFVLSATILEVWCLSSVTWPVNAIFGVVLPIVLGLGWACILSTSPAISASIYLRSIVYLVVSL
LAALSLIDFRSIGLAVAHLVLASFIGFVLVLLD

Sequences:

>Translated_113_residues
MKSMNKKLAVFLLARDLSFVLSATILEVWCLSSVTWPVNAIFGVVLPIVLGLGWACILSTSPAISASIYLRSIVYLVVSL
LAALSLIDFRSIGLAVAHLVLASFIGFVLVLLD
>Mature_113_residues
MKSMNKKLAVFLLARDLSFVLSATILEVWCLSSVTWPVNAIFGVVLPIVLGLGWACILSTSPAISASIYLRSIVYLVVSL
LAALSLIDFRSIGLAVAHLVLASFIGFVLVLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12121; Mature: 12121

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMNKKLAVFLLARDLSFVLSATILEVWCLSSVTWPVNAIFGVVLPIVLGLGWACILST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SPAISASIYLRSIVYLVVSLLAALSLIDFRSIGLAVAHLVLASFIGFVLVLLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSMNKKLAVFLLARDLSFVLSATILEVWCLSSVTWPVNAIFGVVLPIVLGLGWACILST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SPAISASIYLRSIVYLVVSLLAALSLIDFRSIGLAVAHLVLASFIGFVLVLLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA