| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is arsR [C]
Identifier: 28572241
GI number: 28572241
Start: 62354
End: 62647
Strand: Direct
Name: arsR [C]
Synonym: TW071
Alternate gene names: 28572241
Gene position: 62354-62647 (Clockwise)
Preceding gene: 28572235
Following gene: 28572243
Centisome position: 6.73
GC content: 40.82
Gene sequence:
>294_bases ATGGGCTTATCTAGGAAAAACGCGCAGAGCGCAGAAAAACTTTTCAAATGCCTTGCATCCGCGTCAAGACTCAAGATACT GTTCGTTTTGCTTGAATCTGAGAAGTCAGTGGGTGACATAACTGTGGATTGTGATATGAGTCAGCCCCTTGTCTCTCAGC ATTTGCGCCATCTTAGGGATAATAACTTGGTTTATACAAAAAGACACGGAAAGCAAGTTTATTATTCGATAGCAGATGAG CATATAAAACATGTTGTTGCTGATTGCATACAGCATGTTCAGCACGAAACATAA
Upstream 100 bases:
>100_bases AACGGCTAGAATAAAATATGTACCGCAAGGGCAAGAATACCAGGTTTTGTTCAACCAACCGGGGTTGCTCTTTAGGATAT TTGTTTTATTACGGACATGC
Downstream 100 bases:
>100_bases GTCTGTTTACAGTAACTTTCTGACCACCCAAGGTGTCTCACCCCGGGTGGATTGCATAGCTGTCTTGAATACACATCAGG GCAGCTGGTGGTACTAGACA
Product: regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator Arsr Family; Arsenical Resistance Operon Repressor; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; Cadmium Efflux System Accessory Protein; ArsR Family Regulator; Arsr Family Transcriptional Regulator; Regulatory Protein
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MGLSRKNAQSAEKLFKCLASASRLKILFVLLESEKSVGDITVDCDMSQPLVSQHLRHLRDNNLVYTKRHGKQVYYSIADE HIKHVVADCIQHVQHET
Sequences:
>Translated_97_residues MGLSRKNAQSAEKLFKCLASASRLKILFVLLESEKSVGDITVDCDMSQPLVSQHLRHLRDNNLVYTKRHGKQVYYSIADE HIKHVVADCIQHVQHET >Mature_96_residues GLSRKNAQSAEKLFKCLASASRLKILFVLLESEKSVGDITVDCDMSQPLVSQHLRHLRDNNLVYTKRHGKQVYYSIADEH IKHVVADCIQHVQHET
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11072; Mature: 10941
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSRKNAQSAEKLFKCLASASRLKILFVLLESEKSVGDITVDCDMSQPLVSQHLRHLRD CCCCCCCHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCC NNLVYTKRHGKQVYYSIADEHIKHVVADCIQHVQHET CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GLSRKNAQSAEKLFKCLASASRLKILFVLLESEKSVGDITVDCDMSQPLVSQHLRHLRD CCCCCCHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCC NNLVYTKRHGKQVYYSIADEHIKHVVADCIQHVQHET CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA