The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572237

Identifier: 28572237

GI number: 28572237

Start: 57921

End: 58916

Strand: Reverse

Name: 28572237

Synonym: TW067

Alternate gene names: NA

Gene position: 58916-57921 (Counterclockwise)

Preceding gene: 28572238

Following gene: 28572236

Centisome position: 6.36

GC content: 47.19

Gene sequence:

>996_bases
ATGTTCGGTAGGAAGTTACTTGGTGCGCTTGTTGCGCTCTCTCTATTGACAGGCTGTTTTGGCGGTAAAGGTGACTCTGA
GTCGTCTTCTGTTTTGTCAAAAGTTGAGACGGTGTTTGGTGAAGTTACCATACCAAGACCAAAGGGTCATGATCTTAGGG
TTGTAGCCCTAGGGCGGGCTGATGCTGAAGCAGCCCTTGCTGTGGGAATAAAGCCTGTTGCGGTTCTTGATGCATTCAAT
ATCGGCGGTAAGGGTGTTGGCCCTTGGGCCGAGGGGCTGTTTGGTGATGTGAAGCCAACGGTTATGTCTTTTTCAACAGA
TGGATTGAACTGGGAACAAATAAAGGCATTCAAGCCGGATGTTATTTTGGATGTCCGAAGCAAAAACGATGAAAAAACTT
ATAAGCGGTTGAGTCAGATTGCCCCAACGGTATATGGACCAAAAAACTCCAAGGACTACCAGCCATACCAGATTCCCTGG
AGGGATCAGCAAAGGCAGGTTGCCAAGGCTCTTGGGCGCGTAAAAGAGGGTGAAGAGGCTATCAAGAAAACTGAGAAAGC
CATTAAAGATGCTCAGGATCCGCTCTATAGGGGATTAAAAGCTGCCCTTGTTGTGCAGAGACCCTCAGGCTACGGCGTGT
TTGCGGAATCTACGAGACAGTGGGATCTTATTAGAGAATTGGGCTTTACGCTTGAGCCACGGGTGACTGAGCTCTTTGAC
GGGCGTCACGCCGGAAAAGATATTCCCTCGGGTAAGTTAAACCTAATTGACACGGATGTGATTGTCGTAACAGTTAAGCG
CGGGATTAGAAAAGCAGCTAATCACAATGATCCTCTTATTGCTTCTCTAAAGGCCTCAAAAGAGGGAAGGATCATATACG
GGTCTGATGAATTCAATCTGGCTCTTATTGCGGGTTCAGTACTCAGTATTCCTGAAGCAATAAAGTTCCTTAGCGATAAG
CTGCGCGAGATTGCCAAGAAGCTTCGTAATAAGTGA

Upstream 100 bases:

>100_bases
AACCCTTTACTTTCTTTTGTCTAGCTACTAGCCTGGTATATGGCGAATAGGCGGATGTGTTGATTTGTAAGGATAAGTTG
AAATAACAAATAGGAGGGGT

Downstream 100 bases:

>100_bases
ACTGGCCTCAAGGTACATTGGGTGCCTTGAATACTGCGCTTTCGTGCGTGGCCTGGATTATTCCTTTGGGTGTGAGACAG
AATCGTGTTGTTCTGAGATT

Product: iron-siderophore binding lipoprotein

Products: NA

Alternate protein names: ABC-Type Fe3+-Siderophores Transport System; Periplasmic IRON-Transport Lipoprotein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRADAEAALAVGIKPVAVLDAFN
IGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPDVILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPW
RDQQRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNLALIAGSVLSIPEAIKFLSDK
LREIAKKLRNK

Sequences:

>Translated_331_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRADAEAALAVGIKPVAVLDAFN
IGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPDVILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPW
RDQQRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNLALIAGSVLSIPEAIKFLSDK
LREIAKKLRNK
>Mature_331_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRADAEAALAVGIKPVAVLDAFN
IGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPDVILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPW
RDQQRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNLALIAGSVLSIPEAIKFLSDK
LREIAKKLRNK

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36150; Mature: 36150

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCC
DAEAALAVGIKPVAVLDAFNIGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPD
CCHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHCCCCCCHHEEECCCCCCHHHHHHCCCC
VILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPWRDQQRQVAKALGRVKEGEEA
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCHHHHHHHHCCCCCCCCHHHHHC
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNL
CCCCCCCCCCCCEEEEECCEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCEE
ALIAGSVLSIPEAIKFLSDKLREIAKKLRNK
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCC
DAEAALAVGIKPVAVLDAFNIGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPD
CCHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHCCCCCCHHEEECCCCCCHHHHHHCCCC
VILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPWRDQQRQVAKALGRVKEGEEA
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCHHHHHHHHCCCCCCCCHHHHHC
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNL
CCCCCCCCCCCCEEEEECCEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCEE
ALIAGSVLSIPEAIKFLSDKLREIAKKLRNK
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA