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The map label for this gene is yfiY [H]

Identifier: 28572236

GI number: 28572236

Start: 56824

End: 57795

Strand: Reverse

Name: yfiY [H]

Synonym: TW066

Alternate gene names: 28572236

Gene position: 57795-56824 (Counterclockwise)

Preceding gene: 28572237

Following gene: 28572232

Centisome position: 6.24

GC content: 47.43

Gene sequence:

>972_bases
GTGTTCGGTAGGAAGTTACTTGGTGCGCTTGTTGCGCTCTCTCTATTGACAGGCTGTTTTGGCGGTAAAGGTGACTCTGA
GTCGTCTTCTGTTTTGTCAAAAGTTGAGACGGTGTTTGGTGAAGTTACCATACCAAGACCAAAGGGTCATGATCTTAGGG
TTGTAGCCCTCGGATGGTCCGATGCTGAAGCAGCCCTTGCTGTGGGAATAAAGCCTGTTGCGGTGTATGACTGGATTAGC
TTTGGCAATAAGGGTGTTGGCCCTTGGGCCGAGGGGCTGTTTGGTGATGTGAAGCCAGAAGTTATCTCCCGCGGCACGGA
TGGATTGAACTGGGAGCAGATACATAATCTAAAACCTGATTTAATCCTGAATGTCCGCAGCAATAACGATGAAAAAACTT
ATAAGCGGTTGAGTCAGATTGCCCCAACGGTATATGGACCTCCGGGGACAAAGTCATGGGTGTTAAATTGGAGGGATCAG
CAAAGGCAGGTTGCCAAGGCTCTTGGGCGCGTAAAAGAGGGTGAAGAGGCTATCAAGAAAACTGAGAAAGCCATTAAAGA
TGCTCAGGATCCGCTCTATAGGGGATTAAAAGGGGCATTTGTAGCGAAATTCGCGGAGTATGGTGTGTATCTTCCGGGTG
ATGGTCGCTGGGATCTTATGCAAGAGCTCGGCTTTACACTTGAGCCAAAAATAAACGAGTTACCAAAGGCGGGTTTCTAT
GCCAAAATACCAACTGACAAACTAAGCTGGGTAGATACTGATGTGCTAATTGTTATCAGCATCGGAACTGACGATATAAC
CAAAGATGCTTTACTGAGTTCTCTGAAAGCGGCAAAAGAGGGAAGGGTTATATACGCCAACAAAGACTTAGCCAATGTCC
TGAGCGCATCAAGCGCACTCAGCATTCGTGAGGCCATCAAGCGCATTAGCGATAAGCTGCGCGAGATTGCCAAGAAGCTT
CGTAATAAGTGA

Upstream 100 bases:

>100_bases
CTTGAATACTGCGCTTTCGTGCGTGGCCTGGATTATTCCTTTGGGTGTGAGACAGAATCGTGTTGTTCTGAGATTGTTGG
TACAGAGCAATTGAGGGGTT

Downstream 100 bases:

>100_bases
ACTGCTAATCCAGTTACTTGTGCGATTTGTGTGCACATGTATTACGACTTCAGGGGTTCGACTTCTGGGGTACAAAATGT
TTAAGAGGTTTTTATAAACA

Product: iron-siderophore binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWSDAEAALAVGIKPVAVYDWIS
FGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPDLILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQ
QRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSALSIREAIKRISDKLREIAKKL
RNK

Sequences:

>Translated_323_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWSDAEAALAVGIKPVAVYDWIS
FGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPDLILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQ
QRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSALSIREAIKRISDKLREIAKKL
RNK
>Mature_323_residues
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWSDAEAALAVGIKPVAVYDWIS
FGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPDLILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQ
QRQVAKALGRVKEGEEAIKKTEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSALSIREAIKRISDKLREIAKKL
RNK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35378; Mature: 35378

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWS
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCC
DAEAALAVGIKPVAVYDWISFGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPD
CCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCHHHHHCCCCC
LILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQQRQVAKALGRVKEGEEAIKK
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
TEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHCCCCCCCCHHCCCCCCCE
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSAL
EECCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
SIREAIKRISDKLREIAKKLRNK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWS
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCC
DAEAALAVGIKPVAVYDWISFGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPD
CCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCHHHHHCCCCC
LILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQQRQVAKALGRVKEGEEAIKK
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
TEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHCCCCCCCCHHCCCCCCCE
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSAL
EECCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
SIREAIKRISDKLREIAKKLRNK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]