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The map label for this gene is nrfC [H]

Identifier: 326424121

GI number: 326424121

Start: 3098933

End: 3099613

Strand: Reverse

Name: nrfC [H]

Synonym: NA

Alternate gene names: 326424121

Gene position: 3099613-3098933 (Counterclockwise)

Preceding gene: 27366303

Following gene: 27366301

Centisome position: 94.45

GC content: 49.19

Gene sequence:

>681_bases
TTGTTCAAGACGAAATTTCCTTGCTGGTGGTGGCGCGTTGATCATGACAACGGCATTGCTGGCACTTCTATGGTGACTGG
GCGCTTAGCATTTGCGGAAGAGGATAAGGGCCAAGCAATTCGTTATGGCATGATCCACGACGAGACCGCCTGTATCGGAT
GTACGGCTTGTACCGATGCCTGCCGAGAGGTGAACAAAGTCCCTGAAGGCGTAAGTCGATTGGAGATCATACGCAGTGAG
CCGCACGGTGAGTACCCGAATGTCGATTACCGTTTCACCCGTAAATCTTGCCAACACTGTGAAAACCCACCTTGTGTTTA
TGTTTGTCCTACCGGTGCGGCGTACAAAGATGAAAAAACCGGCATCGTGGATGTCCACAAAGAAAAATGTGTCGGTTGCG
GCTATTGCCTTGCCGCGTGTCCCTATCAAGTGCGCTTCTTTAACCCAGTGGATCACTCGGCCGACAAATGCAATTTCTGT
CGAGACACCAATTTGGCGCAAGGCAAGCTACCCGCCTGTGTGGAATCTTGTCCAACTAAGGCACTGATTTTTGGTGATTT
AAATGATCCGCAAAGTGACGTGAATCGAGTATTGGCTGAGAAGGTCTATTACCGAGACAAAGTGCACTTAGGCACGAAAC
CCAAATTATTCAAAATCCCACATCAAAAAGGGGAGGTGTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: NrfC protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:
NA

Sequences:

>Translated_226_residues
MFKTKFPCWWWRVDHDNGIAGTSMVTGRLAFAEEDKGQAIRYGMIHDETACIGCTACTDACREVNKVPEGVSRLEIIRSE
PHGEYPNVDYRFTRKSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQVRFFNPVDHSADKCNFC
RDTNLAQGKLPACVESCPTKALIFGDLNDPQSDVNRVLAEKVYYRDKVHLGTKPKLFKIPHQKGEV
>Mature_226_residues
MFKTKFPCWWWRVDHDNGIAGTSMVTGRLAFAEEDKGQAIRYGMIHDETACIGCTACTDACREVNKVPEGVSRLEIIRSE
PHGEYPNVDYRFTRKSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQVRFFNPVDHSADKCNFC
RDTNLAQGKLPACVESCPTKALIFGDLNDPQSDVNRVLAEKVYYRDKVHLGTKPKLFKIPHQKGEV

Specific function: Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI2367345, Length=219, Percent_Identity=60.7305936073059, Blast_Score=285, Evalue=1e-78,
Organism=Escherichia coli, GI226510944, Length=203, Percent_Identity=44.3349753694581, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789370, Length=242, Percent_Identity=35.1239669421488, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790326, Length=169, Percent_Identity=33.1360946745562, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787749, Length=154, Percent_Identity=34.4155844155844, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787122, Length=159, Percent_Identity=38.3647798742138, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787872, Length=188, Percent_Identity=35.1063829787234, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787740, Length=114, Percent_Identity=35.0877192982456, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787478, Length=149, Percent_Identity=30.2013422818792, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1789067, Length=160, Percent_Identity=32.5, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787963, Length=155, Percent_Identity=28.3870967741935, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082179, Length=147, Percent_Identity=29.9319727891156, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI2367245, Length=162, Percent_Identity=32.7160493827161, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788811, Length=148, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082180, Length=140, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789079, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017567
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25391; Mature: 25391

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTKFPCWWWRVDHDNGIAGTSMVTGRLAFAEEDKGQAIRYGMIHDETACIGCTACTDA
CCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEEHHHHHHH
CREVNKVPEGVSRLEIIRSEPHGEYPNVDYRFTRKSCQHCENPPCVYVCPTGAAYKDEKT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCCCEEEECCCCCCCCCCCC
GIVDVHKEKCVGCGYCLAACPYQVRFFNPVDHSADKCNFCRDTNLAQGKLPACVESCPTK
CEEEECHHHHCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ALIFGDLNDPQSDVNRVLAEKVYYRDKVHLGTKPKLFKIPHQKGEV
EEEEECCCCCHHHHHHHHHHHHHHHCEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MFKTKFPCWWWRVDHDNGIAGTSMVTGRLAFAEEDKGQAIRYGMIHDETACIGCTACTDA
CCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEEHHHHHHH
CREVNKVPEGVSRLEIIRSEPHGEYPNVDYRFTRKSCQHCENPPCVYVCPTGAAYKDEKT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCCCEEEECCCCCCCCCCCC
GIVDVHKEKCVGCGYCLAACPYQVRFFNPVDHSADKCNFCRDTNLAQGKLPACVESCPTK
CEEEECHHHHCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ALIFGDLNDPQSDVNRVLAEKVYYRDKVHLGTKPKLFKIPHQKGEV
EEEEECCCCCHHHHHHHHHHHHHHHCEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]