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The map label for this gene is potC [H]

Identifier: 326424047

GI number: 326424047

Start: 2642025

End: 2642795

Strand: Reverse

Name: potC [H]

Synonym: NA

Alternate gene names: 326424047

Gene position: 2642795-2642025 (Counterclockwise)

Preceding gene: 27365898

Following gene: 27365896

Centisome position: 80.53

GC content: 44.49

Gene sequence:

>771_bases
ATGGGGCGTACAGTTAGATTTAGCTTTATGACGTTGGTTTATGCGTTTCTGTATTTACCAATCATCGTATTGATCGCCAA
CTCGTTTAACGAAAACAAGTTTGGTATGAAATGGGGCGGATTCACCACCAAGTGGTATCACGCGCTAGTGAATAACGACA
GCTTGATGCAAGCTGCATGGCACTCGTTTAACGTTGCGATTTTTTCAGCAACTGCAGCAACGATTATCGGCAGTTTGACG
GCGGTTGCCCTATTCCGCTACCAGTTCAAAGGCAAAAGTGCAGTCAACGGTATGCTGTTTGTCGTAATGATGTCTCCAGA
TATTGTGATGGCTATTTCGCTATTGGCGCTGTTTCTTGTGCTGGGTGCGCAATTGGGTTTCTTTACGCTTTTGGTTGCGC
ACATCACCTTCTGTTTGCCATTTGTTGTGGTCACGGTTTATAGCCGCTTAAACGGTTTTGATGTGAAAATGCTTGAAGCA
GCAAAAGACCTTGGTGCAAGCGAATGGGTGATTCTAAAGCAAATTATTCTGCCATTGGCGAAACCTGCGGTTGCAGCTGG
TTGGTTGCTGAGTTTTACCCTATCTTTAGATGACGTTATCATCAGCTCGTTTGTAACGGGCCCGACTTATGAGATTCTAT
CACTGAAAATCTACTCAATGGTTAAAGTGGGTATCTCTCCAGAAGTCAACGCATTGGCAACCGTCATGCTGGTCGTGTCA
CTCGTATTGGTGATTACCTCGCAAATCCTTGCGAGAGAAAAAGTTAAATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: spermidine/putrescine ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:
NA

Sequences:

>Translated_256_residues
MGRTVRFSFMTLVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALVNNDSLMQAAWHSFNVAIFSATAATIIGSLT
AVALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLVLGAQLGFFTLLVAHITFCLPFVVVTVYSRLNGFDVKMLEA
AKDLGASEWVILKQIILPLAKPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILSLKIYSMVKVGISPEVNALATVMLVVS
LVLVITSQILAREKVK
>Mature_255_residues
GRTVRFSFMTLVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALVNNDSLMQAAWHSFNVAIFSATAATIIGSLTA
VALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLVLGAQLGFFTLLVAHITFCLPFVVVTVYSRLNGFDVKMLEAA
KDLGASEWVILKQIILPLAKPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILSLKIYSMVKVGISPEVNALATVMLVVSL
VLVITSQILAREKVK

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=256, Percent_Identity=74.609375, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI1787081, Length=260, Percent_Identity=40.3846153846154, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1787714, Length=240, Percent_Identity=30, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788764, Length=210, Percent_Identity=29.5238095238095, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28095; Mature: 27964

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTVRFSFMTLVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALVNNDSLMQAAW
CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHH
HSFNVAIFSATAATIIGSLTAVALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLV
HHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
LGAQLGFFTLLVAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
KPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILSLKIYSMVKVGISPEVNALATVMLVVS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVLVITSQILAREKVK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRTVRFSFMTLVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALVNNDSLMQAAW
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHH
HSFNVAIFSATAATIIGSLTAVALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLV
HHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
LGAQLGFFTLLVAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
KPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILSLKIYSMVKVGISPEVNALATVMLVVS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVLVITSQILAREKVK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]