| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is thiB [H]
Identifier: 326423753
GI number: 326423753
Start: 720684
End: 721712
Strand: Reverse
Name: thiB [H]
Synonym: NA
Alternate gene names: 326423753
Gene position: 721712-720684 (Counterclockwise)
Preceding gene: 27364160
Following gene: 326423752
Centisome position: 21.99
GC content: 49.85
Gene sequence:
>1029_bases ATGCCAAATGGAGAGCGAGCAGTGAAACACACTCTAAACCTGATAGCCCTAGCGTCAATCACGTCAATGATGGGCATCTC TTCTTCTGCACTTGCGGCGGACAAAACCTTAACCATTTATACCTACGATTCTTTTGCTTCCGATTGGGGCCCTGGCCCGA CAGTCGAAAAAGCATTTGAAGCTCAGTGCGGCTGCGATGTGAATTTTGTCGCGCTGGACGATGGGGTGTCAATTCTCAAC CGCTTACGTTTAGAAGGCAGCAATACCAAAGCGGATATTGTTTTAGGTTTGGATAACAATTTGATGGCAGAAGCTAAAGC CACAGGTTTGCTGGCGCCACATCAAGTGAACACCCAAGCGCTGTCATTGCCAAATGGTTGGGCTGACGACACGTTTATTC CTTATGACTACGGTTACTTTGCGTTTGTTTACAACAAAGGCAAACTGGCGAATCCACCCAAGAGCTTAAAAGAGCTGGTG GAATCACGCGACGATCTGAAAGTCATCTACCAAGACCCTCGCACTTCAACACCCGGTCAAGGTTTGATGCTGTGGATAAA GTCAGTGTATGGCGATGACGTGGCTGGAGCATGGCAGCAACTGGCGAAGAAAACCGTGACGGTCACGAAAGGTTGGTCGG AAGCGTACTCGATGTTCCTCAAAGGCGAATCGGACATGGTGCTCTCTTACACCACCTCACCTGCGTACCACCTGATTGCC GAAAATGATGCGCAATATGCCGCGGCGGGTTTTAGTGAAGGACACTACATGCAAGTGGAAGTCGCCGCAAAAGTGAAAAG TAGCCAGAACTCAGCGCTGGCTGATCAGTTTATGAGTTTCATTTTGAGTGATGAGTTCCAAAGCGCAATGCCTACGGGCA ACTGGATGTACCCAGTGACCAACGTGACGCTGCCAGAGGGCTACCGCAGTTTAACCGTGCCTGAGAAGGCGTTGAGTTTC AGTGCGGAAGAGGTAGCGAAGCAGCGTAAAGCTTGGATTCGCGAATGGCAAAGCGCGTTGACGTTTTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: thiamin/thiamin pyrophosphate ABC transporter thiamin/thiamin pyrophospate-binding protein
Products: ADP; phosphate; thiamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
NA
Sequences:
>Translated_342_residues MPNGERAVKHTLNLIALASITSMMGISSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVALDDGVSILN RLRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQALSLPNGWADDTFIPYDYGYFAFVYNKGKLANPPKSLKELV ESRDDLKVIYQDPRTSTPGQGLMLWIKSVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIA ENDAQYAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLTVPEKALSF SAEEVAKQRKAWIREWQSALTF >Mature_341_residues PNGERAVKHTLNLIALASITSMMGISSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVALDDGVSILNR LRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQALSLPNGWADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVE SRDDLKVIYQDPRTSTPGQGLMLWIKSVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAE NDAQYAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLTVPEKALSFS AEEVAKQRKAWIREWQSALTF
Specific function: Part of the ABC transporter complex thiBPQ involved in thiamine import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1786255, Length=309, Percent_Identity=65.6957928802589, Blast_Score=445, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 - InterPro: IPR005948 - InterPro: IPR005967 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37492; Mature: 37360
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNGERAVKHTLNLIALASITSMMGISSSALAADKTLTIYTYDSFASDWGPGPTVEKAFE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCHHCCCCCCCCHHHHHH AQCGCDVNFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQA HHCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEE LSLPNGWADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQ EECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC GLMLWIKSVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIA HHHHHHHHHHCCCHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCEEEEEECCCEEEEEE ENDAQYAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVT CCCCCEEECCCCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC NVTLPEGYRSLTVPEKALSFSAEEVAKQRKAWIREWQSALTF EEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNGERAVKHTLNLIALASITSMMGISSSALAADKTLTIYTYDSFASDWGPGPTVEKAFE CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCHHCCCCCCCCHHHHHH AQCGCDVNFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQA HHCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEE LSLPNGWADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQ EECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC GLMLWIKSVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIA HHHHHHHHHHCCCHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCEEEEEECCCEEEEEE ENDAQYAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVT CCCCCEEECCCCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC NVTLPEGYRSLTVPEKALSFSAEEVAKQRKAWIREWQSALTF EEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; thiamine [Periplasm]; H2O [C]
Specific reaction: ATP + thiamine [Periplasm] + H2O = ADP + phosphate + thiamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503; 9535878 [H]