| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27366373
Identifier: 27366373
GI number: 27366373
Start: 3173469
End: 3174098
Strand: Reverse
Name: 27366373
Synonym: VV1_3105
Alternate gene names: NA
Gene position: 3174098-3173469 (Counterclockwise)
Preceding gene: 27366374
Following gene: 27366370
Centisome position: 96.72
GC content: 44.6
Gene sequence:
>630_bases ATGAAAATCAAACTATATTACGTCCATGATCCTATGTGCAGCTGGTGCTGGGGATACAAACCTACCTTGGAAAAATTGAA GCAACAGTTACCTGGAGTCATTCAGTTTGAGTATGTGGTTGGCGGCTTAGCGCCAGATTCAACATTGCCGATGCCACCTG AAATGCAGCAAAAAATTGAAAGCATTTGGCATCAAATTGAACAGCGCCTAGGGACTCAATTTAATTATGAGTTTTGGACA AGTTGTACACCAGTTCGTAGTACCTATCAGGCGTGTCGTGCGGTGATTGCCGCAGGTTTTCAAGATTCTTATGAGCAAAT GCTAGAGGCGATCCAACACGCGTATTATTTGCGCGCCATGCCGCCACATGATGAAGCGACACATCGCCAGCTTGCGCAAG AAATTGGACTCAATGTTCAACAGTTTGAAAACGATGTGACGGGGCGTTTATTGGAAGGTGTCTTTGAAGATCAACTGAGT TTAGCTCGAAGCTTAGGCGTAAACTCTTACCCAAGTTTAGTATTGCAAATTAACGATGCGTATTTTCCAATCGAGATCGA TTACCTCTCCACCGAACCGACGTTAAAGTTGATCCGTGAGCGCATTGTCGAGAATATGCCCGCTCAATAG
Upstream 100 bases:
>100_bases ACCACTATGGAGCTTGAAAGAGTTTCGGTAGTGGTTATCTTCAAACGAAGATAGAATACGAAGGAGCTGTTTGGCTCCTT TTTGTTTTTGAGTTACTACC
Downstream 100 bases:
>100_bases TGTGATGAAAATAACGCGATGAAATAGGCCAGCGAGACACGCTGAAAAGACCAACCTATTTTTATTGAAAGAGAAAGCCG CTCAACAGAGCGGCTTCTTT
Product: thioredoxin
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Dithiol-Disulfide Isomerase; Dsba Oxidoreductase; Thioredoxin-Like Fold; Protein-Disulfide Isomerase-Like Protein; DsbA Oxidoreductase; Thioredoxin
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT SCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFEDQLS LARSLGVNSYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ
Sequences:
>Translated_209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT SCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFEDQLS LARSLGVNSYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ >Mature_209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT SCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFEDQLS LARSLGVNSYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24166; Mature: 24166
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIE CEEEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHH SIWHQIEQRLGTQFNYEFWTSCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFEDQLSLARSLGVNSYPSLVLQINDA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC YFPIEIDYLSTEPTLKLIRERIVENMPAQ EEEEEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIE CEEEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHH SIWHQIEQRLGTQFNYEFWTSCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFEDQLSLARSLGVNSYPSLVLQINDA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC YFPIEIDYLSTEPTLKLIRERIVENMPAQ EEEEEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA