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The map label for this gene is motY [H]

Identifier: 27366370

GI number: 27366370

Start: 3170249

End: 3171130

Strand: Reverse

Name: motY [H]

Synonym: VV1_3102

Alternate gene names: 27366370

Gene position: 3171130-3170249 (Counterclockwise)

Preceding gene: 27366373

Following gene: 326424130

Centisome position: 96.63

GC content: 44.78

Gene sequence:

>882_bases
ATGAAAAAGTGGCTAATAACCAGTGGTTTAGTACTAACTACCTTTGCATCATTGCCATCGGCAGCGATGACGAAGCGTTA
TATTGCCACCCCGCAGCAATCACAATGGGAAATGGTGATGAATTCACCGCTGGAATGCCGTTTGGTGCATCCGATCCCTA
ACTACGGTGATGCGGAATTCTCTTCACGCGCAAGTAAAAAAATTGTGTTGGATTTTGAGCTAAAAATGCGTCGACCTATG
GGCGAAACACGCAATGTGAGTTTGATTTCGATGCCGCCTCCATGGCGACCAGGAGAAAATGCCGACCGCATTACTAATAT
TAAGTTCTTTCAACAGTTTAATGGTTATGTTGGTGGGCAAACGGCATGGGGCATTCTGTCTGAGTTAGAGAAAGGGCGTT
ATCCGACGTTTAGTTATCAAGATTGGCAAAGCCGTGACCAAAGAATTGAAGTTGCGCTATCTGCCGTTCTGTTCCAGCAA
AAATACAACGTATTTAGCGATTGTGTCGCCAATCTGTTGCCTTACAGCTTTGAAGATATTTCGTTCACTATTCTGCATTA
TGAACGCAATGGGGATAAACTCACCAAGGCATCGCAAAAGCGCTTGTCGCAGATTGCTGAATACGTGCGCTACAACTCTG
ATATTGATTTGGTGTTGGTTTCGACTTACACCGATTCCACTGATGGTACTAGCGTTAGCCAAAACTTATCAGAACGTAGA
GCGGAATCGTTGAGAGATTATTTCAAAGCACTAGGATTGACGGAAGATCGCATCCAAGTTCAAGGTTATGGTAAACGCCG
CCCAATTGCAGACAACGCAACGCCTATTGGTAAAGATAAAAACCGCCGCGTTGTCATTTCACTGGGGCGAAGTGAAGTTT
AG

Upstream 100 bases:

>100_bases
TTGGCGAGGTTTTTGCATAAATGTGTAAGTCAGATAGAATTCATCCGGTAGTGGCAAATGTCTGCCACGCAACCGTGAGC
GAGTAAGAGAAGTAGTGATA

Downstream 100 bases:

>100_bases
TTGAGTTTGAACTTTGCGATGATTTCGCAATGGGTAGCCGTGTCAATCTTCTCCACCAGCTGCGCGATCTTTGGGTTTGG
GTGACGCTTTAAAAAATCGA

Product: sodium-type flagellar protein motY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKWLITSGLVLTTFASLPSAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRRPM
GETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQ
KYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERR
AESLRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV

Sequences:

>Translated_293_residues
MKKWLITSGLVLTTFASLPSAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRRPM
GETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQ
KYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERR
AESLRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
>Mature_293_residues
MKKWLITSGLVLTTFASLPSAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRRPM
GETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQ
KYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERR
AESLRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33494; Mature: 33494

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWLITSGLVLTTFASLPSAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEF
CCCEEEECCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHH
SSRASKKIVLDFELKMRRPMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQ
HCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
TAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDI
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERR
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
AESLRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKWLITSGLVLTTFASLPSAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEF
CCCEEEECCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHH
SSRASKKIVLDFELKMRRPMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQ
HCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
TAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFEDI
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERR
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
AESLRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8021208; 12620739 [H]