| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yqjG [H]
Identifier: 27366346
GI number: 27366346
Start: 3145911
End: 3146861
Strand: Reverse
Name: yqjG [H]
Synonym: VV1_3077
Alternate gene names: 27366346
Gene position: 3146861-3145911 (Counterclockwise)
Preceding gene: 27366347
Following gene: 27366332
Centisome position: 95.89
GC content: 46.37
Gene sequence:
>951_bases ATGGGCAAATTAATTGAAGGGGTATGGCACGACGTTTGGTACGATACAAAGCAGACCAAAGGAAAGTTCGTGCGTGAAGA TGCAGGATTTCGTGACTGGATTGAAAATAAACCACAAGCACCCTTTCAGCCGGAATCGGGTCGCTATCACCTTTATGTTT CGTTAGCTTGCCCTTGGGCACACCGAACGCTGATTTTCCGCAAATTAAAGGGGCTGGAAGAGCATATTGATGTCACCGTG GTTTGCCCTGACATGCTCAGTGATGGATGGAAGATGGGGTTGCCAGAGCCCTTGTTTGGTCATACCAAATTGCATCAAAT CTATACCCAAGCAAAACCTGATTATACTGGGCGAGTGACGGTTCCCGTTCTTTGGGACAAGAAAACCAATACAATCGTGA GCAACGAATCATCGGAAATCATTCGCATGTTTAACTCGGCGTTTAATCAACTGACGGGGAATCAAGATGATTACTATCCA GATTCATTACGTGAGGTGATCGAAGAGTGGAACGCCTTCATTTACCCCAACATCAACAACGGCGTTTATCGTTGTGGGTT TGCCACGACGCAAGAGGCTTATGAAGAAGCGTATAACGCTCTTTTTTCTGCACTCGATCGTGTGGAGCATCATCTCGCGA CGCATCGTTACTTAGCGGGCAGCCAAATGACTGAAGCCGATTGGCGCCTGTTCACCACACTGATCCGCTTTGATGCGGTG TACGTTGGTCATTTTAAGTGTAATCAAAAGCGTATTGCGGATTACCCCCATCTTAATGGCTACATGAAAGAGCTGTATCA GATCGAAGGGATTGCTGAAACGACAGATTTCTACCACATTAAACGCCATTACTATTTTAGTCACATTGGGATTAATCCAA CGCAAGTTGTGCCATTAGGCCCCAATTTGGATTTGGACAGTGACCACGGTCGTGAGGGCATTGGACGTTAG
Upstream 100 bases:
>100_bases TGTCGGTGATACGTTCAAATTTTTCGAATATCACTTGCAAATATTAGCGCTTAATAAATCACGTCCTTTTCCTATACTGA GAAAAAAGTGAGGAGGGTTC
Downstream 100 bases:
>100_bases GGAATTTGCGATCAGATGTCGTGAAGTGAACTTAAATAAAACGGAGGTCATGACCTCCGTTTTTGCTGTTATTGAGCGCG GCTTTCGAAGCAAGCCGCTA
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MGKLIEGVWHDVWYDTKQTKGKFVREDAGFRDWIENKPQAPFQPESGRYHLYVSLACPWAHRTLIFRKLKGLEEHIDVTV VCPDMLSDGWKMGLPEPLFGHTKLHQIYTQAKPDYTGRVTVPVLWDKKTNTIVSNESSEIIRMFNSAFNQLTGNQDDYYP DSLREVIEEWNAFIYPNINNGVYRCGFATTQEAYEEAYNALFSALDRVEHHLATHRYLAGSQMTEADWRLFTTLIRFDAV YVGHFKCNQKRIADYPHLNGYMKELYQIEGIAETTDFYHIKRHYYFSHIGINPTQVVPLGPNLDLDSDHGREGIGR
Sequences:
>Translated_316_residues MGKLIEGVWHDVWYDTKQTKGKFVREDAGFRDWIENKPQAPFQPESGRYHLYVSLACPWAHRTLIFRKLKGLEEHIDVTV VCPDMLSDGWKMGLPEPLFGHTKLHQIYTQAKPDYTGRVTVPVLWDKKTNTIVSNESSEIIRMFNSAFNQLTGNQDDYYP DSLREVIEEWNAFIYPNINNGVYRCGFATTQEAYEEAYNALFSALDRVEHHLATHRYLAGSQMTEADWRLFTTLIRFDAV YVGHFKCNQKRIADYPHLNGYMKELYQIEGIAETTDFYHIKRHYYFSHIGINPTQVVPLGPNLDLDSDHGREGIGR >Mature_315_residues GKLIEGVWHDVWYDTKQTKGKFVREDAGFRDWIENKPQAPFQPESGRYHLYVSLACPWAHRTLIFRKLKGLEEHIDVTVV CPDMLSDGWKMGLPEPLFGHTKLHQIYTQAKPDYTGRVTVPVLWDKKTNTIVSNESSEIIRMFNSAFNQLTGNQDDYYPD SLREVIEEWNAFIYPNINNGVYRCGFATTQEAYEEAYNALFSALDRVEHHLATHRYLAGSQMTEADWRLFTTLIRFDAVY VGHFKCNQKRIADYPHLNGYMKELYQIEGIAETTDFYHIKRHYYFSHIGINPTQVVPLGPNLDLDSDHGREGIGR
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=324, Percent_Identity=56.1728395061728, Blast_Score=370, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6322929, Length=360, Percent_Identity=38.6111111111111, Blast_Score=226, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323906, Length=355, Percent_Identity=37.7464788732394, Blast_Score=207, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321593, Length=344, Percent_Identity=31.6860465116279, Blast_Score=155, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36750; Mature: 36619
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLIEGVWHDVWYDTKQTKGKFVREDAGFRDWIENKPQAPFQPESGRYHLYVSLACPWA CCHHHHHHHHHHHCCCHHHCCCHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCHH HRTLIFRKLKGLEEHIDVTVVCPDMLSDGWKMGLPEPLFGHTKLHQIYTQAKPDYTGRVT HHHHHHHHHHCHHHHCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE VPVLWDKKTNTIVSNESSEIIRMFNSAFNQLTGNQDDYYPDSLREVIEEWNAFIYPNINN EEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCC GVYRCGFATTQEAYEEAYNALFSALDRVEHHLATHRYLAGSQMTEADWRLFTTLIRFDAV CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNQKRIADYPHLNGYMKELYQIEGIAETTDFYHIKRHYYFSHIGINPTQVVPLG EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCEEEECC PNLDLDSDHGREGIGR CCCCCCCCCCCCCCCC >Mature Secondary Structure GKLIEGVWHDVWYDTKQTKGKFVREDAGFRDWIENKPQAPFQPESGRYHLYVSLACPWA CHHHHHHHHHHHCCCHHHCCCHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCHH HRTLIFRKLKGLEEHIDVTVVCPDMLSDGWKMGLPEPLFGHTKLHQIYTQAKPDYTGRVT HHHHHHHHHHCHHHHCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE VPVLWDKKTNTIVSNESSEIIRMFNSAFNQLTGNQDDYYPDSLREVIEEWNAFIYPNINN EEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCC GVYRCGFATTQEAYEEAYNALFSALDRVEHHLATHRYLAGSQMTEADWRLFTTLIRFDAV CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNQKRIADYPHLNGYMKELYQIEGIAETTDFYHIKRHYYFSHIGINPTQVVPLG EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCEEEECC PNLDLDSDHGREGIGR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]