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The map label for this gene is trpH [H]

Identifier: 27366332

GI number: 27366332

Start: 3133878

End: 3134759

Strand: Reverse

Name: trpH [H]

Synonym: VV1_3063

Alternate gene names: 27366332

Gene position: 3134759-3133878 (Counterclockwise)

Preceding gene: 27366346

Following gene: 27366331

Centisome position: 95.52

GC content: 47.96

Gene sequence:

>882_bases
ATGAGAATAGATTTACATAGCCACACGACGGCCTCGGATGGTCGTTTTTCACCGCAAGAACTCATCGAGCGAGCCCTTAC
GTTTGACTTGGATGTGCTCGCGGTGACCGATCATGATACGGTAGAAGCGTTGGCGGAAATACATCGTTATGTCGATGAGA
AGCAATTGCCAATTAAAATCATTAATGGCATTGAAATATCCACGGTTTGGCAGAATAAAGACATCCATGTCGTGGGATTA
AATGTTGATCCTAACAACATGACACTGAATCAACTGATTGAGCAGCAACAAGAACATCGTGTTAACCGCGCTGAGCTGAT
TGCACAACGTTTGCAAAAAGCGACACGGGAAGGTGTGCTCGAAGAGGTGCGACAAATCGCTGATGGAGCGCCGATTACCC
GTGCTCACTTTGCCAAATGGCTGGTGGATAATGGTTATGCCAAAACGATGCAGCAGGTGTTTAAAAAATACTTAACGCGT
AACAACCCGGGTTATGTCCCGCCAAACTGGTGTTCAATTGATGACGCAGTGAAAGCCATTCATGCCGCAGGGGGCCAAGC
GGTGCTTGCACACCCAGCGCGATACAACTTGACGGCGAAATGGTTGAAACGCTTGTTACAAGCCTTTGTCGAGGCCGGTG
GCGATGCGATGGAAGTAGCGCAGCCACAACAATCGCAGCAAGAAAGGCGCAATTTGGCTGATTATGCAATACAATACAAA
CTATTAGCTTCCCAAGGCAGTGATTTTCATTATCCGTCTCCGTGGATGGAATTGGGAAGAAACCTCTGGTTACCCGCGGG
GGTTGAACCAGTGTGGAAAGATTGGGGTTTAGAACCGGTAGACAAAATTCAAACCGTGTCTACGATTGCCCCAGAGCTAT
AG

Upstream 100 bases:

>100_bases
AAATTCTTGTAACATGGTCGGCCCTATAGTCAGGTACTTTGTATTTGTGTACTAGTTAACTAGTGCAAGGGTAAAAAGTC
AACCCCCTAGTAGCAAATAT

Downstream 100 bases:

>100_bases
AGCCGAGAGGTTCGATAATGAGGAATTACCATGAGCCAGTTTTTTTACGTTCATCCAGAAAACCCACAGGCTCGCTTGAT
TAATCAAGCCGTAGCAATCA

Product: putative metal-dependent phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRIDLHSHTTASDGRFSPQELIERALTFDLDVLAVTDHDTVEALAEIHRYVDEKQLPIKIINGIEISTVWQNKDIHVVGL
NVDPNNMTLNQLIEQQQEHRVNRAELIAQRLQKATREGVLEEVRQIADGAPITRAHFAKWLVDNGYAKTMQQVFKKYLTR
NNPGYVPPNWCSIDDAVKAIHAAGGQAVLAHPARYNLTAKWLKRLLQAFVEAGGDAMEVAQPQQSQQERRNLADYAIQYK
LLASQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLEPVDKIQTVSTIAPEL

Sequences:

>Translated_293_residues
MRIDLHSHTTASDGRFSPQELIERALTFDLDVLAVTDHDTVEALAEIHRYVDEKQLPIKIINGIEISTVWQNKDIHVVGL
NVDPNNMTLNQLIEQQQEHRVNRAELIAQRLQKATREGVLEEVRQIADGAPITRAHFAKWLVDNGYAKTMQQVFKKYLTR
NNPGYVPPNWCSIDDAVKAIHAAGGQAVLAHPARYNLTAKWLKRLLQAFVEAGGDAMEVAQPQQSQQERRNLADYAIQYK
LLASQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLEPVDKIQTVSTIAPEL
>Mature_293_residues
MRIDLHSHTTASDGRFSPQELIERALTFDLDVLAVTDHDTVEALAEIHRYVDEKQLPIKIINGIEISTVWQNKDIHVVGL
NVDPNNMTLNQLIEQQQEHRVNRAELIAQRLQKATREGVLEEVRQIADGAPITRAHFAKWLVDNGYAKTMQQVFKKYLTR
NNPGYVPPNWCSIDDAVKAIHAAGGQAVLAHPARYNLTAKWLKRLLQAFVEAGGDAMEVAQPQQSQQERRNLADYAIQYK
LLASQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLEPVDKIQTVSTIAPEL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=272, Percent_Identity=55.8823529411765, Blast_Score=322, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 33179; Mature: 33179

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDLHSHTTASDGRFSPQELIERALTFDLDVLAVTDHDTVEALAEIHRYVDEKQLPIKI
CEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEE
INGIEISTVWQNKDIHVVGLNVDPNNMTLNQLIEQQQEHRVNRAELIAQRLQKATREGVL
ECCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EEVRQIADGAPITRAHFAKWLVDNGYAKTMQQVFKKYLTRNNPGYVPPNWCSIDDAVKAI
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HAAGGQAVLAHPARYNLTAKWLKRLLQAFVEAGGDAMEVAQPQQSQQERRNLADYAIQYK
HHCCCCEEEECCHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
LLASQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLEPVDKIQTVSTIAPEL
HHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIDLHSHTTASDGRFSPQELIERALTFDLDVLAVTDHDTVEALAEIHRYVDEKQLPIKI
CEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEE
INGIEISTVWQNKDIHVVGLNVDPNNMTLNQLIEQQQEHRVNRAELIAQRLQKATREGVL
ECCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EEVRQIADGAPITRAHFAKWLVDNGYAKTMQQVFKKYLTRNNPGYVPPNWCSIDDAVKAI
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HAAGGQAVLAHPARYNLTAKWLKRLLQAFVEAGGDAMEVAQPQQSQQERRNLADYAIQYK
HHCCCCEEEECCHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
LLASQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLEPVDKIQTVSTIAPEL
HHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]