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The map label for this gene is ywbD [H]

Identifier: 27366146

GI number: 27366146

Start: 2931201

End: 2932133

Strand: Reverse

Name: ywbD [H]

Synonym: VV1_2866

Alternate gene names: 27366146

Gene position: 2932133-2931201 (Counterclockwise)

Preceding gene: 326424090

Following gene: 27366137

Centisome position: 89.34

GC content: 47.59

Gene sequence:

>933_bases
ATGCAAGCATCACACCTAACGACATTTTTCCAGCATGTCGAATCGCAGTTACAGCAAGCTCCCGATGAGATTCGCCGTCT
TTTTCATGGGCGTGGCCGACGTTTTGAAGGGCTAGAACAAATTACCTGTGATTGGCTGCACGGCCAGTTGATCGTCAATC
TCTTCAAACAAGTGGATGAGGCGTTCTTACAATGTCTAAGAGAAGGTTTGTTAGCACTAACGAACACACCATTGTGGCAA
GAGAAGCTTGGTCGCTGCGTGGTGATTCAGCACCGCTATGCCGATGGTGATCCAGCCGAAGTGTTGGTTGGCGAGTTGGA
AGCGCGTCCTGTGGTTGTCGAGAGTGGCCTGAAATATCAATTAGATATTGGCCGAAATCAGAACTTTGGCCTCTTTTTGG
ATATGCGCTATGGCCGCGATTGGGTACGCAAAAATGCCAAACACAAAAATGTACTCAACTTGTTTGCCTACACCTGTGGT
TTCTCTGTTGCGGCGATCGCAGGTGGAGCGGACAAAGTGGTGAATGTCGATATGGCCAAATCGTCATTGTCGAAAGGGCG
TGACAACCACAAGTTAAATGAGCACAACATCAATCAGGTTAGCTTCTTGGGATACGACATCTTTAAATCTTGGGGGAAAA
TCAAAAAAGCGGGCCCTTATGATTTGGTGATTATTGATCCGCCGTCGTTTCAAAAGGGCAGTTTTGCGCTAACCAAGGAT
TACAAGAAGATTCTTCGCCGTCTGCCAGAGTTATTGACAGACCAAGGTGAGGTGTTGGCATGCGTTAACTCTCCTGCAGT
GAGCAGTGATTTCTTGATTGAAAGCATGAAAGAAGAAGCGCCCCAGTTGACCTTCCGTGAGCGTTTGGACAATCCCCCTG
AGTTTATGGATATCGACAGTGAAGCCGCGCTGAAAGTGCTGCGCTTCAATTAA

Upstream 100 bases:

>100_bases
GGAACAGCGAGGCGCTTAACCAAGCGATTGAACAATGGTTAACACCTTGGCGACTCAACTGGCCAACCATCAATAAATAA
ACGAATGAGTAGAGACAGAG

Downstream 100 bases:

>100_bases
CAGCGTATCCACCGCACGTGAAAATGCCCTCAATCGTGAGGGCGTTTGTTTATCAAATGCATAGCTTGTTAGTGCAAGCA
CACCTCCAGATCCGATTCGA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRKNAKHKNVLNLFAYTCG
FSVAAIAGGADKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN

Sequences:

>Translated_310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRKNAKHKNVLNLFAYTCG
FSVAAIAGGADKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN
>Mature_310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRKNAKHKNVLNLFAYTCG
FSVAAIAGGADKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=193, Percent_Identity=30.5699481865285, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787181, Length=135, Percent_Identity=34.0740740740741, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 35240; Mature: 35240

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDE
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLQCLREGLLALTNTPLWQEKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEE
LDIGRNQNFGLFLDMRYGRDWVRKNAKHKNVLNLFAYTCGFSVAAIAGGADKVVNVDMAK
EECCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEHHHHH
SSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDS
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCH
EAALKVLRFN
HHHHEEHCCC
>Mature Secondary Structure
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDE
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLQCLREGLLALTNTPLWQEKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEE
LDIGRNQNFGLFLDMRYGRDWVRKNAKHKNVLNLFAYTCGFSVAAIAGGADKVVNVDMAK
EECCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEHHHHH
SSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDS
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCH
EAALKVLRFN
HHHHEEHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]