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The map label for this gene is ydhL [H]

Identifier: 27366137

GI number: 27366137

Start: 2921244

End: 2921492

Strand: Reverse

Name: ydhL [H]

Synonym: VV1_2857

Alternate gene names: 27366137

Gene position: 2921492-2921244 (Counterclockwise)

Preceding gene: 27366146

Following gene: 27366135

Centisome position: 89.02

GC content: 44.18

Gene sequence:

>249_bases
ATGGAGCAATTGGAGTTTTTCACTGTACCCAGCCCTTGTGTGGGGGTTTGCAGTGTCGATGACAAAGGTTATTGCAATGG
ATGCATGCGTAAACGTGAAGAGCGTTTTAACTGGCTAAACATGACACCAAGTGAACAGCTGCACGTGATTAAACTCTGTC
GTCAGCGTTATCGTCGTAAGCTTGCACAGGGTAAAGATCCATCAAGCACAAAAGAAGAAGTACAAAGCCCGCAGCAAGAT
TTATTTTAA

Upstream 100 bases:

>100_bases
TTAAAGCAACCATGGTCATGTTTTCATTAGAGAATGCTTTCTTACCTCATGGAGATACGATTAGAGTGAACAGTGAGAGC
GATAAGCAGCAGGAGGCGGT

Downstream 100 bases:

>100_bases
CTCTCCCTAGTACACTTTTGAGATCTGTTGACTAAGGAGAGCTAAATGCATTCGTTGATGACTATTTTAGCCCCCACTTA
TCGTTTACCCACCCCCCGGC

Product: putative Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MEQLEFFTVPSPCVGVCSVDDKGYCNGCMRKREERFNWLNMTPSEQLHVIKLCRQRYRRKLAQGKDPSSTKEEVQSPQQD
LF

Sequences:

>Translated_82_residues
MEQLEFFTVPSPCVGVCSVDDKGYCNGCMRKREERFNWLNMTPSEQLHVIKLCRQRYRRKLAQGKDPSSTKEEVQSPQQD
LF
>Mature_82_residues
MEQLEFFTVPSPCVGVCSVDDKGYCNGCMRKREERFNWLNMTPSEQLHVIKLCRQRYRRKLAQGKDPSSTKEEVQSPQQD
LF

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081952, Length=72, Percent_Identity=54.1666666666667, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010710 [H]

Pfam domain/function: PF06945 DUF1289 [H]

EC number: NA

Molecular weight: Translated: 9629; Mature: 9629

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLEFFTVPSPCVGVCSVDDKGYCNGCMRKREERFNWLNMTPSEQLHVIKLCRQRYRRK
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LAQGKDPSSTKEEVQSPQQDLF
HHCCCCCCCCHHHHCCCHHCCC
>Mature Secondary Structure
MEQLEFFTVPSPCVGVCSVDDKGYCNGCMRKREERFNWLNMTPSEQLHVIKLCRQRYRRK
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LAQGKDPSSTKEEVQSPQQDLF
HHCCCCCCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]