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The map label for this gene is yegE [C]

Identifier: 27366135

GI number: 27366135

Start: 2918676

End: 2920298

Strand: Reverse

Name: yegE [C]

Synonym: VV1_2854

Alternate gene names: 27366135

Gene position: 2920298-2918676 (Counterclockwise)

Preceding gene: 27366137

Following gene: 27366125

Centisome position: 88.98

GC content: 46.77

Gene sequence:

>1623_bases
ATGAACTTGTTGCGAATGTTTGGAACGCTTATGCCTGTATTGCGACCTTCTCTGCGTGCAATTTTGTTATCAGTGATGCT
GTTAGTGTCTGTTGTACCTATTGTGCTTTTTTCGTACTGGGCGGTTCAGCATGCACTTGAGAAAGAGTATCGAGCCGTGA
ATGAAAAGCACTTACTGCTTGCCAAAAACCTGAGTGCCGCTTTAGAGCGCTACAGCGTCGATGTGCTCTCGGTGTTTGAA
TCGATCAGCGATGAGTTTGATAGCAATGAACTCTCTGCCCAACAAATTAACCTTCTCCAGCAGCTCAATTTACATGCTTT
GGCGCGTTATTCAAAAAACACCATGCAACGTCGAGTGTTGTTTGGTGAGCCCGTCTATTTTCCCAAAACCTTGGATCTCA
ACGCCGATCAAATCACGCGAGTTACCCCGGTGATTTCACAGTCTCTTCCTCAACCCACGATTTATCTCTATCGTGAAGAT
AAATACGGACGAGTTTGGGTGGCGGCGATGGCGAATGAGTATGTTGCTCAGCTTCAAGAGGCGGTGAGCTTTGGCGAGAA
AGGGCATGCCGCTATTGTCGATAACACCGGAAGCGTATTGGCTCATCCGAACAAAGAGTGGCAAGCTCAGGCGAAAAATA
TTGCCAAAATCAGTGTGGTAAAACGGATGTTAAGAGGGGAAACCGGCGTGGAGCGCTTTTATTCACCGGCAATGAAGGCA
GACATGATTGCTGGGTTTACTGTGACGCCGACGTTAGGCTGGGGCATTATGATTCCTCAACCCGTGAGTGAATTAGATGC
TGCAATCAACGATTTTAAAAAAGTGACGTTTGTGGTAGCCATCGCCTGTTTTGTCATCTGTTTTATCTTAAGTTGGCAGC
TCTCGGGTCTGCTAATGCGGCCAATAAGGAAACTCACTAAACAAATTCAAGGAATGACGGAGAGCCACATCTCTCATTTG
GAAACCATCGAAGGTTTTACTGGAATTAAAGAGACTCAAGCGTTGGTGGAAAGCTTCAATCTCATGGCTAATGAAGTGAA
TCGTGGGCGAAAAGAGCTCGAATTTAGAGTCTTAGAAAGAACCAAAGAGCTGAAATCGGCAGAGCGTTTTGCGCGTCATC
TTGCGTCACATGATTCTGTCACGGATTTGCCGAATCGTACTGCCGTGAGACAAGCGATAGCAAAATTCTTGGAGCGTAAG
CAGCCGTTTTCACTGTTATTTATTGACCTTGATGGCTTTAAAGCCGTCAATGATGAGTATGGTCACCAAACCGGCGATCT
CCTTTTGAAAGCGGTCGCTCAGCGGTTACTGGATACTGTGGGTCAGGAGGACATGGCGGCTCGTTATGCCGGAGATGAGT
TTATCGTTTTATTGAAGAATCAATCGACGCAAGAAGCGACCCAAATCGCTCAAGCACTGCTTGAGACGATTGCGATACCA
GTGATTGTTGAGCGCAAAGCCCTCGTCATTGGCGCAAGTATTGGATTAGTGACGGTTGACGTTGAGACGACGTCAACCAA
TGTGGATAGCCTCATTCACGAGGCGGATATCGCTATGTACCAAGCAAAATCCGCAGGCAAGGGAAGAGTTGTCCAAGTGC
AAAAAGCCAATGAAAGCAACTGA

Upstream 100 bases:

>100_bases
TGACTTTGATGCCACCTCTAAACGCCGTATCTTATAAATCATTATAATTTCTATAAATGACAGTTGGCGCAGGTTAACGT
TAAGCACAGCTAAGGTGCTT

Downstream 100 bases:

>100_bases
TCATCCACAAGACATCATCCAGCAAGGAATCCTAAATCTTTTTGCGCAAAATGCTTGAGATTGGGGAATACATCGAGCAA
TTGCTGCTCAGTTTGAATAC

Product: GGDEF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MNLLRMFGTLMPVLRPSLRAILLSVMLLVSVVPIVLFSYWAVQHALEKEYRAVNEKHLLLAKNLSAALERYSVDVLSVFE
SISDEFDSNELSAQQINLLQQLNLHALARYSKNTMQRRVLFGEPVYFPKTLDLNADQITRVTPVISQSLPQPTIYLYRED
KYGRVWVAAMANEYVAQLQEAVSFGEKGHAAIVDNTGSVLAHPNKEWQAQAKNIAKISVVKRMLRGETGVERFYSPAMKA
DMIAGFTVTPTLGWGIMIPQPVSELDAAINDFKKVTFVVAIACFVICFILSWQLSGLLMRPIRKLTKQIQGMTESHISHL
ETIEGFTGIKETQALVESFNLMANEVNRGRKELEFRVLERTKELKSAERFARHLASHDSVTDLPNRTAVRQAIAKFLERK
QPFSLLFIDLDGFKAVNDEYGHQTGDLLLKAVAQRLLDTVGQEDMAARYAGDEFIVLLKNQSTQEATQIAQALLETIAIP
VIVERKALVIGASIGLVTVDVETTSTNVDSLIHEADIAMYQAKSAGKGRVVQVQKANESN

Sequences:

>Translated_540_residues
MNLLRMFGTLMPVLRPSLRAILLSVMLLVSVVPIVLFSYWAVQHALEKEYRAVNEKHLLLAKNLSAALERYSVDVLSVFE
SISDEFDSNELSAQQINLLQQLNLHALARYSKNTMQRRVLFGEPVYFPKTLDLNADQITRVTPVISQSLPQPTIYLYRED
KYGRVWVAAMANEYVAQLQEAVSFGEKGHAAIVDNTGSVLAHPNKEWQAQAKNIAKISVVKRMLRGETGVERFYSPAMKA
DMIAGFTVTPTLGWGIMIPQPVSELDAAINDFKKVTFVVAIACFVICFILSWQLSGLLMRPIRKLTKQIQGMTESHISHL
ETIEGFTGIKETQALVESFNLMANEVNRGRKELEFRVLERTKELKSAERFARHLASHDSVTDLPNRTAVRQAIAKFLERK
QPFSLLFIDLDGFKAVNDEYGHQTGDLLLKAVAQRLLDTVGQEDMAARYAGDEFIVLLKNQSTQEATQIAQALLETIAIP
VIVERKALVIGASIGLVTVDVETTSTNVDSLIHEADIAMYQAKSAGKGRVVQVQKANESN
>Mature_540_residues
MNLLRMFGTLMPVLRPSLRAILLSVMLLVSVVPIVLFSYWAVQHALEKEYRAVNEKHLLLAKNLSAALERYSVDVLSVFE
SISDEFDSNELSAQQINLLQQLNLHALARYSKNTMQRRVLFGEPVYFPKTLDLNADQITRVTPVISQSLPQPTIYLYRED
KYGRVWVAAMANEYVAQLQEAVSFGEKGHAAIVDNTGSVLAHPNKEWQAQAKNIAKISVVKRMLRGETGVERFYSPAMKA
DMIAGFTVTPTLGWGIMIPQPVSELDAAINDFKKVTFVVAIACFVICFILSWQLSGLLMRPIRKLTKQIQGMTESHISHL
ETIEGFTGIKETQALVESFNLMANEVNRGRKELEFRVLERTKELKSAERFARHLASHDSVTDLPNRTAVRQAIAKFLERK
QPFSLLFIDLDGFKAVNDEYGHQTGDLLLKAVAQRLLDTVGQEDMAARYAGDEFIVLLKNQSTQEATQIAQALLETIAIP
VIVERKALVIGASIGLVTVDVETTSTNVDSLIHEADIAMYQAKSAGKGRVVQVQKANESN

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=34.6368715083799, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787541, Length=171, Percent_Identity=35.0877192982456, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=38.562091503268, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87082007, Length=168, Percent_Identity=35.7142857142857, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI145693134, Length=229, Percent_Identity=31.0043668122271, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787262, Length=182, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1788956, Length=276, Percent_Identity=27.536231884058, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081881, Length=175, Percent_Identity=34.2857142857143, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787802, Length=168, Percent_Identity=26.7857142857143, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787816, Length=171, Percent_Identity=29.8245614035088, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786584, Length=175, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788085, Length=192, Percent_Identity=25.5208333333333, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 60318; Mature: 60318

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLRMFGTLMPVLRPSLRAILLSVMLLVSVVPIVLFSYWAVQHALEKEYRAVNEKHLLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AKNLSAALERYSVDVLSVFESISDEFDSNELSAQQINLLQQLNLHALARYSKNTMQRRVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGEPVYFPKTLDLNADQITRVTPVISQSLPQPTIYLYREDKYGRVWVAAMANEYVAQLQE
CCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
AVSFGEKGHAAIVDNTGSVLAHPNKEWQAQAKNIAKISVVKRMLRGETGVERFYSPAMKA
HHHCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
DMIAGFTVTPTLGWGIMIPQPVSELDAAINDFKKVTFVVAIACFVICFILSWQLSGLLMR
HHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIRKLTKQIQGMTESHISHLETIEGFTGIKETQALVESFNLMANEVNRGRKELEFRVLER
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TKELKSAERFARHLASHDSVTDLPNRTAVRQAIAKFLERKQPFSLLFIDLDGFKAVNDEY
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHC
GHQTGDLLLKAVAQRLLDTVGQEDMAARYAGDEFIVLLKNQSTQEATQIAQALLETIAIP
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
VIVERKALVIGASIGLVTVDVETTSTNVDSLIHEADIAMYQAKSAGKGRVVQVQKANESN
HEEECCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MNLLRMFGTLMPVLRPSLRAILLSVMLLVSVVPIVLFSYWAVQHALEKEYRAVNEKHLLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AKNLSAALERYSVDVLSVFESISDEFDSNELSAQQINLLQQLNLHALARYSKNTMQRRVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGEPVYFPKTLDLNADQITRVTPVISQSLPQPTIYLYREDKYGRVWVAAMANEYVAQLQE
CCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
AVSFGEKGHAAIVDNTGSVLAHPNKEWQAQAKNIAKISVVKRMLRGETGVERFYSPAMKA
HHHCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
DMIAGFTVTPTLGWGIMIPQPVSELDAAINDFKKVTFVVAIACFVICFILSWQLSGLLMR
HHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIRKLTKQIQGMTESHISHLETIEGFTGIKETQALVESFNLMANEVNRGRKELEFRVLER
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TKELKSAERFARHLASHDSVTDLPNRTAVRQAIAKFLERKQPFSLLFIDLDGFKAVNDEY
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHC
GHQTGDLLLKAVAQRLLDTVGQEDMAARYAGDEFIVLLKNQSTQEATQIAQALLETIAIP
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
VIVERKALVIGASIGLVTVDVETTSTNVDSLIHEADIAMYQAKSAGKGRVVQVQKANESN
HEEECCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]