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The map label for this gene is 27366114

Identifier: 27366114

GI number: 27366114

Start: 2896550

End: 2897176

Strand: Reverse

Name: 27366114

Synonym: VV1_2832

Alternate gene names: NA

Gene position: 2897176-2896550 (Counterclockwise)

Preceding gene: 27366115

Following gene: 326424080

Centisome position: 88.28

GC content: 45.77

Gene sequence:

>627_bases
ATGGCTCCAAGAAGCAGTACAAAAGAAAAAATCCTTGATGTAGCCGAAGGTTTATTTGCGGAATACGGTTTTAATGACAC
GTCATTGCGCACCATAACGGGTAAAGCAGGCGTTAATCTTGCGTCCGTGAATTACCATTTTGGCGATAAGAAAACCTTAG
TTCGTGCAGTACTCAACCGTTATTTGGAGGCTCTGATGCCTGCGGTAAAGCAATCTCTGACTCAGCTCAACAGTCAAGAG
AGCTATACGATGGATGAAGTGTTTGAGTCGCTTCGATTGCCGCTAAGAGAGCTCAATGATGTCAGGCCCAATGGTACCAG
CCTTTTTATGCTTCTCATTGGTCGAGGCTATACCGACGTGCAGGGCCATCTAAGATGGTTTATCACGACACGTTACGCCG
AAGTGCTGGAGCTTTTTATCGCCTCCATCCTAAAAGCCAATCCAGCATTGACGGAAGAAAAACTATTCTGGCGTTTGCAC
TTCACTTTAGGCACGTGTGTTTTCACCATGGCTTCTAGCCAAGCGTTAGTGGAAATTGCAGACAGTAAATTTAATCAACA
GACCGACGTGAAATCTGTCGTTGATCTATTGATTCCCTATCTCTCAGCCGGCATGTCCGCTGAGTAG

Upstream 100 bases:

>100_bases
AACCTGGTCGGACCAATGTTGAAAAGTGTGATGTTAATTGCTTGTTAATTTATGGTGTCAAACGTATATTTCAAACAGTT
GTTTGATACGGGTGATTAAA

Downstream 100 bases:

>100_bases
CTATTATTAAAATACAAACAAGGACCAACAGGTTCCACCAAGTGAACAAAAGGATCTGAACTATGTGCTCTCTAAGAAAA
AAATGGGTCAGCGACCCAGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PsrA; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAPRSSTKEKILDVAEGLFAEYGFNDTSLRTITGKAGVNLASVNYHFGDKKTLVRAVLNRYLEALMPAVKQSLTQLNSQE
SYTMDEVFESLRLPLRELNDVRPNGTSLFMLLIGRGYTDVQGHLRWFITTRYAEVLELFIASILKANPALTEEKLFWRLH
FTLGTCVFTMASSQALVEIADSKFNQQTDVKSVVDLLIPYLSAGMSAE

Sequences:

>Translated_208_residues
MAPRSSTKEKILDVAEGLFAEYGFNDTSLRTITGKAGVNLASVNYHFGDKKTLVRAVLNRYLEALMPAVKQSLTQLNSQE
SYTMDEVFESLRLPLRELNDVRPNGTSLFMLLIGRGYTDVQGHLRWFITTRYAEVLELFIASILKANPALTEEKLFWRLH
FTLGTCVFTMASSQALVEIADSKFNQQTDVKSVVDLLIPYLSAGMSAE
>Mature_207_residues
APRSSTKEKILDVAEGLFAEYGFNDTSLRTITGKAGVNLASVNYHFGDKKTLVRAVLNRYLEALMPAVKQSLTQLNSQES
YTMDEVFESLRLPLRELNDVRPNGTSLFMLLIGRGYTDVQGHLRWFITTRYAEVLELFIASILKANPALTEEKLFWRLHF
TLGTCVFTMASSQALVEIADSKFNQQTDVKSVVDLLIPYLSAGMSAE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23324; Mature: 23193

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRSSTKEKILDVAEGLFAEYGFNDTSLRTITGKAGVNLASVNYHFGDKKTLVRAVLNR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHH
YLEALMPAVKQSLTQLNSQESYTMDEVFESLRLPLRELNDVRPNGTSLFMLLIGRGYTDV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCH
QGHLRWFITTRYAEVLELFIASILKANPALTEEKLFWRLHFTLGTCVFTMASSQALVEIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DSKFNQQTDVKSVVDLLIPYLSAGMSAE
HHHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
APRSSTKEKILDVAEGLFAEYGFNDTSLRTITGKAGVNLASVNYHFGDKKTLVRAVLNR
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHH
YLEALMPAVKQSLTQLNSQESYTMDEVFESLRLPLRELNDVRPNGTSLFMLLIGRGYTDV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCH
QGHLRWFITTRYAEVLELFIASILKANPALTEEKLFWRLHFTLGTCVFTMASSQALVEIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DSKFNQQTDVKSVVDLLIPYLSAGMSAE
HHHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA