| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365987
Identifier: 27365987
GI number: 27365987
Start: 2745595
End: 2746158
Strand: Reverse
Name: 27365987
Synonym: VV1_2696
Alternate gene names: NA
Gene position: 2746158-2745595 (Counterclockwise)
Preceding gene: 27365988
Following gene: 27365985
Centisome position: 83.68
GC content: 45.39
Gene sequence:
>564_bases ATGCGTTTACTCACCAGTGTTTCTTTGGTATCGGTGATCTTTCTAAGTGGCTTTGCTGCCTTTGTCGCTTTGAAAACTGT GCCTCAGTTAAATTTTGCGTCGAAAGGTATGGACTGGCAGTGGCATTGGGCGTATTTCCTGCCATTCTCGAATGGCATTC AACAGACTCGGACTCAAGACACCAAACAATTGCTATTGAGGCGAGTCTATTTGGAAGATGACATTGCGGTTTTTGTTTCA ACCACGTTGGACAACAAGTTCGAAATTGACGTGTTTAAAGCGGCTAAGTGTAACGCGACTTCTAGTGAGTGGGCCTCGGT TTCGGTAAATGGGGCGCCTATGACGCACGTCCCGTTGAAGTGTGAGGCTAGTGGTGACGGTTATCTCTTTCGCCATGTTG GGAACAAGTTGAAGTCCTTGGAATTTGGCTTTGAAGATGACTTCATTATCGAAAGCTTTGCACAATGGCCGATTAACGAA ATCAAAGCGGATCAATTTAAACAGCAACATCCGACGTTTTTCAAAAAGCAGGGCGTTGAGGTGGAGCAGTGGCTAAGAGA TTAA
Upstream 100 bases:
>100_bases ATCTTTTGAAAAATGCGCAGTTCATGAAATGGATGGAAGGCGCAACAGGGGCCGTTTTGGTGGCTCTTGGTATTAAACTT TTGGTTGAAAAGCCAGTCTG
Downstream 100 bases:
>100_bases ACAGACAAGATTGTGCTTGAGAGCATCTATCCACAACAGCAATAAAAACGCCCGCGATCACGAAGTGACAGCGGGCTTTT TTGTGTTAGAACTTAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS TTLDNKFEIDVFKAAKCNATSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE IKADQFKQQHPTFFKKQGVEVEQWLRD
Sequences:
>Translated_187_residues MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS TTLDNKFEIDVFKAAKCNATSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE IKADQFKQQHPTFFKKQGVEVEQWLRD >Mature_187_residues MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS TTLDNKFEIDVFKAAKCNATSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE IKADQFKQQHPTFFKKQGVEVEQWLRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21410; Mature: 21410
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH TKQLLLRRVYLEDDIAVFVSTTLDNKFEIDVFKAAKCNATSSEWASVSVNGAPMTHVPLK HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEECCEE CEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINEIKADQFKQQHPTFFKKQGVE EECCCCCEEHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC VEQWLRD HHHHHCC >Mature Secondary Structure MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH TKQLLLRRVYLEDDIAVFVSTTLDNKFEIDVFKAAKCNATSSEWASVSVNGAPMTHVPLK HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEECCEE CEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINEIKADQFKQQHPTFFKKQGVE EECCCCCEEHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC VEQWLRD HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA