Click here to switch to the map view.

The map label for this gene is ccoS

Identifier: 27365908

GI number: 27365908

Start: 2651106

End: 2651276

Strand: Reverse

Name: ccoS

Synonym: VV1_2613

Alternate gene names: NA

Gene position: 2651276-2651106 (Counterclockwise)

Preceding gene: 27365909

Following gene: 27365907

Centisome position: 80.79

GC content: 40.35

Gene sequence:

>171_bases
ATGGAAAGTTTGTATCTTCTTATCCCAATTGCAATTGTGTTGGTTTGTGTTGCTGTAGCGATATTTCTTTGGGCGGTAAA
AAGCGAGCAGTTTGAAGATCTCGAAAGGCAAGGCAGTAACATTTTGTTCGATGAAGAGCATGTCAAGCCGACGGAAAAAG
AGAAATCTTGA

Upstream 100 bases:

>100_bases
TTTGGTTGCGCCTTATATTGCGGTTGTAGGAATGTCTGGTAGCTCTATAATAGTGGTCTCTAACTCCTTAAGACTGCTCA
AAGAGCGTGGAAAGTAAACA

Downstream 100 bases:

>100_bases
TGGCACCAGATGTTATTGGAGCCTTTATGATCGGCCTTGCCGGGGCCGGTCATTGCATTGGAATGTGCGGCGGTATCGCT
TCTTTACTTAATCTAGGACA

Product: cytochrome oxidase maturation protein, cbb3-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MESLYLLIPIAIVLVCVAVAIFLWAVKSEQFEDLERQGSNILFDEEHVKPTEKEKS

Sequences:

>Translated_56_residues
MESLYLLIPIAIVLVCVAVAIFLWAVKSEQFEDLERQGSNILFDEEHVKPTEKEKS
>Mature_56_residues
MESLYLLIPIAIVLVCVAVAIFLWAVKSEQFEDLERQGSNILFDEEHVKPTEKEKS

Specific function: Unknown

COG id: COG3197

COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6421; Mature: 6421

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLYLLIPIAIVLVCVAVAIFLWAVKSEQFEDLERQGSNILFDEEHVKPTEKEKS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MESLYLLIPIAIVLVCVAVAIFLWAVKSEQFEDLERQGSNILFDEEHVKPTEKEKS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA