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The map label for this gene is spr [C]

Identifier: 27365862

GI number: 27365862

Start: 2602844

End: 2603272

Strand: Reverse

Name: spr [C]

Synonym: VV1_2566

Alternate gene names: 27365862

Gene position: 2603272-2602844 (Counterclockwise)

Preceding gene: 27365864

Following gene: 27365858

Centisome position: 79.32

GC content: 45.69

Gene sequence:

>429_bases
GTGTTGCTAAGTGGTTGTAGCCAAAGCCCGAAAGCGCCAGAGACATCAGCAGCACTTTGGGAACAAAACCGAGAGCTAAA
AACGTTTTATGGCGAATGGTATGGCACGCCCTATCAGTTTGGTGGGAATACTAAAGAAGGGATTGATTGCTCTGCTTTTG
TACAACAAGCGTTTCTCTACGCCTATCAACGAGCGCTACCAAGAACGACCTTGGCACAGTTTAATGCTTCCCAACCGATA
CGTTGGGAAGAGAGGCAACAAGGCGATCTACTATTCTTCAAAACAACGAAATCCGATTATCACGTGGGGATCTATCTCAA
CCACCAGCAGTTCATGCACGCGTCCACTTCAAAAGGGGTCATCATTTCGAGAACGGATAATCCATATTGGGCGAGTAAGT
TTTGGCAAATAAGAAGGGTTACAATGTAA

Upstream 100 bases:

>100_bases
GGGTGAGTCTATGAGATGGCTGTGACGCTTACGTGACAAATATAAGACAGCGAGATGACAAGTGGCTCAATTTAACCGAT
TCATTATCATATCCATTTTT

Downstream 100 bases:

>100_bases
CCCTTCTTATGAATAGTGCGGACTAAAAACAAATCAGCGAATATTACGGCTTAGTCGTATTTTGCTACAGCGGTATCGAA
CAGATTTTTTACTAAAGCAA

Product: cell wall-associated hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLLSGCSQSPKAPETSAALWEQNRELKTFYGEWYGTPYQFGGNTKEGIDCSAFVQQAFLYAYQRALPRTTLAQFNASQPI
RWEERQQGDLLFFKTTKSDYHVGIYLNHQQFMHASTSKGVIISRTDNPYWASKFWQIRRVTM

Sequences:

>Translated_142_residues
MLLSGCSQSPKAPETSAALWEQNRELKTFYGEWYGTPYQFGGNTKEGIDCSAFVQQAFLYAYQRALPRTTLAQFNASQPI
RWEERQQGDLLFFKTTKSDYHVGIYLNHQQFMHASTSKGVIISRTDNPYWASKFWQIRRVTM
>Mature_142_residues
MLLSGCSQSPKAPETSAALWEQNRELKTFYGEWYGTPYQFGGNTKEGIDCSAFVQQAFLYAYQRALPRTTLAQFNASQPI
RWEERQQGDLLFFKTTKSDYHVGIYLNHQQFMHASTSKGVIISRTDNPYWASKFWQIRRVTM

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=163, Percent_Identity=38.0368098159509, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI1788001, Length=145, Percent_Identity=43.448275862069, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 16493; Mature: 16493

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSGCSQSPKAPETSAALWEQNRELKTFYGEWYGTPYQFGGNTKEGIDCSAFVQQAFLY
CCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
AYQRALPRTTLAQFNASQPIRWEERQQGDLLFFKTTKSDYHVGIYLNHQQFMHASTSKGV
HHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHCCCCCCCCE
IISRTDNPYWASKFWQIRRVTM
EEEECCCCCHHHHHEEEEEECC
>Mature Secondary Structure
MLLSGCSQSPKAPETSAALWEQNRELKTFYGEWYGTPYQFGGNTKEGIDCSAFVQQAFLY
CCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
AYQRALPRTTLAQFNASQPIRWEERQQGDLLFFKTTKSDYHVGIYLNHQQFMHASTSKGV
HHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHCCCCCCCCE
IISRTDNPYWASKFWQIRRVTM
EEEECCCCCHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]