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The map label for this gene is 27365864

Identifier: 27365864

GI number: 27365864

Start: 2605468

End: 2606274

Strand: Reverse

Name: 27365864

Synonym: VV1_2568

Alternate gene names: NA

Gene position: 2606274-2605468 (Counterclockwise)

Preceding gene: 27365867

Following gene: 27365862

Centisome position: 79.41

GC content: 45.6

Gene sequence:

>807_bases
ATGAACCAAACCGCCATGACCGATCCGTCTCTTATCCGCATGGGATTTTTTGTTGGAACCTTGCTGCTGTGTTTATTGTG
GGAGAATAAACGGCCGCGTAAACCATGGACAGTTTCACGCTCGTTTCGCTGGCTGAACAATCTCTCGCTTGTGCTGCTTA
ATAGTGTTTTAGTTGCGTTACTGCTTCCTATTGTCGCTTTCCAAGCGGCAATCTTGGCCCGGCAGCATCAATTCGGCCTT
TTCCATCTGCTCGGTTTGAGCGACATCGTCAATATCCTATTGTCGGTATTGCTGTTGGATTTCATTATCTATTGCCAGCA
TTTGCTGTTCCATCGCATAAAACCGCTGTGGCGATTACATCGAATGCACCACGCTGATTTGGATATTGATGTCACGACAG
GAACTCGTTTTCATCCAATAGAGATCTTGCTCTCTATGGTGATCAAAATAACGTTTGTCAGCTTACTTGGCGTATCACCT
CTCGCGGTGGTGGTGTTTGAAATCATCCTCAATGTAAGTGCGATGTTTAACCACAGTAACGCCAAGCTGCCTTTAACCGT
TGATCATTGGTTAAGAAAGTGGATCGTGACTCCAGATATGCACAGAGTGCATCACTCCATTGAAGTGAAGGAAACCCATT
CCAATTTTGGCTTCTTCCTGTCTATTTGGGACCGCTGTTTCCATACGTATCGTGAACAACCTAAAGCGGGTCATGAAGGC
GTTGTTATTGGCATTCCAGAGATTCGCAATCCTAATGAACAACGGCTCGATAAGATGCTCACCCAGCCGTTTAGAAACCA
TTTCTGA

Upstream 100 bases:

>100_bases
GAAATGGGTGCACGATTTTATCGGCAGTTCTCTCACACGACAAGCTCTCACTGGCTTGTCGTGTCCGTCACCCGTATCAA
TAACCAGGTAGGGAAATTCC

Downstream 100 bases:

>100_bases
ATCCACTAGAGTACGGTGGAACGTCACGCAAGTTGGTAGCTATGCAGCATCTCTTGTTGTTTGGCGGCAATGCTCGATAC
TTGGTGCGAACTCTCCACCA

Product: Sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase-Like; YhhN Family Protein; YhhN-Like Protein; TRAP Dicarboxylate Transporter; Sterol Desaturase Family Protein; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Yhhn Family Protein; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNQTAMTDPSLIRMGFFVGTLLLCLLWENKRPRKPWTVSRSFRWLNNLSLVLLNSVLVALLLPIVAFQAAILARQHQFGL
FHLLGLSDIVNILLSVLLLDFIIYCQHLLFHRIKPLWRLHRMHHADLDIDVTTGTRFHPIEILLSMVIKITFVSLLGVSP
LAVVVFEIILNVSAMFNHSNAKLPLTVDHWLRKWIVTPDMHRVHHSIEVKETHSNFGFFLSIWDRCFHTYREQPKAGHEG
VVIGIPEIRNPNEQRLDKMLTQPFRNHF

Sequences:

>Translated_268_residues
MNQTAMTDPSLIRMGFFVGTLLLCLLWENKRPRKPWTVSRSFRWLNNLSLVLLNSVLVALLLPIVAFQAAILARQHQFGL
FHLLGLSDIVNILLSVLLLDFIIYCQHLLFHRIKPLWRLHRMHHADLDIDVTTGTRFHPIEILLSMVIKITFVSLLGVSP
LAVVVFEIILNVSAMFNHSNAKLPLTVDHWLRKWIVTPDMHRVHHSIEVKETHSNFGFFLSIWDRCFHTYREQPKAGHEG
VVIGIPEIRNPNEQRLDKMLTQPFRNHF
>Mature_268_residues
MNQTAMTDPSLIRMGFFVGTLLLCLLWENKRPRKPWTVSRSFRWLNNLSLVLLNSVLVALLLPIVAFQAAILARQHQFGL
FHLLGLSDIVNILLSVLLLDFIIYCQHLLFHRIKPLWRLHRMHHADLDIDVTTGTRFHPIEILLSMVIKITFVSLLGVSP
LAVVVFEIILNVSAMFNHSNAKLPLTVDHWLRKWIVTPDMHRVHHSIEVKETHSNFGFFLSIWDRCFHTYREQPKAGHEG
VVIGIPEIRNPNEQRLDKMLTQPFRNHF

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31163; Mature: 31163

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTAMTDPSLIRMGFFVGTLLLCLLWENKRPRKPWTVSRSFRWLNNLSLVLLNSVLVAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLPIVAFQAAILARQHQFGLFHLLGLSDIVNILLSVLLLDFIIYCQHLLFHRIKPLWRLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHADLDIDVTTGTRFHPIEILLSMVIKITFVSLLGVSPLAVVVFEIILNVSAMFNHSN
HHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
AKLPLTVDHWLRKWIVTPDMHRVHHSIEVKETHSNFGFFLSIWDRCFHTYREQPKAGHEG
CCCCEEHHHHHHHHCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VVIGIPEIRNPNEQRLDKMLTQPFRNHF
EEEECCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQTAMTDPSLIRMGFFVGTLLLCLLWENKRPRKPWTVSRSFRWLNNLSLVLLNSVLVAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLPIVAFQAAILARQHQFGLFHLLGLSDIVNILLSVLLLDFIIYCQHLLFHRIKPLWRLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHADLDIDVTTGTRFHPIEILLSMVIKITFVSLLGVSPLAVVVFEIILNVSAMFNHSN
HHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
AKLPLTVDHWLRKWIVTPDMHRVHHSIEVKETHSNFGFFLSIWDRCFHTYREQPKAGHEG
CCCCEEHHHHHHHHCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VVIGIPEIRNPNEQRLDKMLTQPFRNHF
EEEECCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA