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The map label for this gene is insI1 [C]

Identifier: 27365840

GI number: 27365840

Start: 2581690

End: 2582319

Strand: Reverse

Name: insI1 [C]

Synonym: VV1_2539

Alternate gene names: 27365840

Gene position: 2582319-2581690 (Counterclockwise)

Preceding gene: 27365847

Following gene: 27365839

Centisome position: 78.68

GC content: 46.67

Gene sequence:

>630_bases
ATGAGATACACGCACCTCACTGAGAACGAAAGGTATATGATTTCTGCGCTCAGAAAGCAAGGAATTAGTACCGCTAAAAT
AGCTAAACAACTAGGTCGTCACAAAGCTACTATCTATCGAGAAATTGAACGTAATTCCCGATACAACAGACACTTTAGAA
GGTTCTCCTATCAAGCATGGAGAGCCCAACAGATGGCTCGCAACCGGCTAAGCCGCTCGCGCAGAAACAAGCGCTATAGC
GAAATCGACTTCAGGTTACCTGAAGCCTTGCTACGACTGGATTGGAGCCCTGACCAAATCGTCGGATACCTAAGGGTAAG
AGGCTATCCAACAATGAGCCACGAGCTCATTTATCAGCATATTTGGAACGACAAAACTCTCGGTGGAACACTATGGAAAC
ATCTACGCCAATCGACCAAGAAAAGGCGCAAAAGATATAACTCAAAAGACAGCCGAGGTCGGCTGGCAGCAAAGCGTCAT
ATTACCGAAAGACCTGCAAAAGCTGAGCATCGAAATGAGCCTGGCCATTGGGAAATTGATACCGTCGTTGGCCCGCGGAC
CAAAGCACTGTATCGTAACTTTAGTCGACAGAATGACTGGCTACACTTTTATAGGGCAAATGGACGATAG

Upstream 100 bases:

>100_bases
TTAGCTTACTTGGATTCAAGTACGAAGTGCGACACCTCTGAACATAAAAACAGTGAGATGCGATAATCATGAAGTTTGCT
CCCGCCAAGAAGTAAAAAAC

Downstream 100 bases:

>100_bases
AACAAGCGAGTCGCTCAACGTAAGAATGAGCAAAATCATGACCCGCTCTGACTTACCTTTTAAGACGATAACTGCGGATA
ACGGCACTGAATTTCATGGT

Product: transposase and inactivated derivatives

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFRRFSYQAWRAQQMARNRLSRSRRNKRYS
EIDFRLPEALLRLDWSPDQIVGYLRVRGYPTMSHELIYQHIWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRH
ITERPAKAEHRNEPGHWEIDTVVGPRTKALYRNFSRQNDWLHFYRANGR

Sequences:

>Translated_209_residues
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFRRFSYQAWRAQQMARNRLSRSRRNKRYS
EIDFRLPEALLRLDWSPDQIVGYLRVRGYPTMSHELIYQHIWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRH
ITERPAKAEHRNEPGHWEIDTVVGPRTKALYRNFSRQNDWLHFYRANGR
>Mature_209_residues
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFRRFSYQAWRAQQMARNRLSRSRRNKRYS
EIDFRLPEALLRLDWSPDQIVGYLRVRGYPTMSHELIYQHIWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRH
ITERPAKAEHRNEPGHWEIDTVVGPRTKALYRNFSRQNDWLHFYRANGR

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25465; Mature: 25465

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFRRFSYQAW
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RAQQMARNRLSRSRRNKRYSEIDFRLPEALLRLDWSPDQIVGYLRVRGYPTMSHELIYQH
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
IWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRHITERPAKAEHRNEPGHWEID
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCEEEE
TVVGPRTKALYRNFSRQNDWLHFYRANGR
CCCCCHHHHHHHHHCCCCCCEEEEECCCC
>Mature Secondary Structure
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFRRFSYQAW
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RAQQMARNRLSRSRRNKRYSEIDFRLPEALLRLDWSPDQIVGYLRVRGYPTMSHELIYQH
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
IWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRHITERPAKAEHRNEPGHWEID
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCEEEE
TVVGPRTKALYRNFSRQNDWLHFYRANGR
CCCCCHHHHHHHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]