| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is dnaK [H]
Identifier: 27365639
GI number: 27365639
Start: 2342641
End: 2345448
Strand: Reverse
Name: dnaK [H]
Synonym: VV1_2318
Alternate gene names: 27365639
Gene position: 2345448-2342641 (Counterclockwise)
Preceding gene: 27365640
Following gene: 27365638
Centisome position: 71.47
GC content: 51.1
Gene sequence:
>2808_bases ATGGCATCTCCTCGCTATCTTGTCGGCATTGACTTAGGCACCACCAACACGGTGGTTGCGTTTTGTGAACTGACCGAGAA CTTACAACAATCCAACGTCTCCCTTTTCGATATTGACCAGCTTATTGGCCCCGGTGAAGTGGTTCGTAAGCCACTACTGC CCTCTTTCCGCTACCACCCTGCCAACGGGCAAATCGCCCCGGCGGATCTCACCTTACCGTGGGAAAACCAAACTGTGGCT GGCGACATTGCTAATGTGATCATTGGTGAATGGGCGCGTGAACTGGGCGCAAAGGTAGAAGGGCGTCAGGTTTCAAGCGC TAAGAGCTGGCTGTCTCACCAAGCGGTTGATCGCCATTCAGACATACTGCCGTGGGCTGGGGTTGGCGATGTTGAGAAGG TTTCCCCTGTTATTGCCAGTGCCAGTTACCTTAATCACATTCGCCAAGCATGGAATCATCGCCACCCGGGCAATCTGCTC GAAGATCAAGAGGTGGTGGTCACCGTACCGGCTTCGTTTGATGAAACTGCACGTAAGCTGACCCTCGAAGCCGCTCAACT GGCAGGCTTAAGCCAAGTGCTTCTGCTCGAAGAGCCTCAAGCGGTTTGTTACGACTGGTATGCTCGCCACCAGCACAGTG CCGCAGAGTTATTAAAAGAAATCCCGCTGATTTTGGTGTGTGATGTCGGCGGCGGTACCACTGACTTAAGCTTGATTGAA GCAAAATTTAACCAAGACGCCCTCGCCTTGGATCGCATCGGGGTTGGTGAACACCTCATGCTCGGTGGTGATAACCTAGA TTTGGCCCTCGCGCATTTAGCGGAGCAGCGCTTTAATCAAAGCAAAAAACTCAATGCGGCCAGCCTCACCAAACTGATTC AGCAAACACGCAAAGCCAAAGAGCAACTCCTCTCAAGTACAGCGCCGGAAGAAGTGAAGATCACCATGTTGGGCAGTGGT TCCAAACTGCTTGGTGGCACCAAAAGCATCTCGTTGAATAAACAAGAAGTTCATCAAATCGCCCTCGACGGCTTCTTCCC ACTTTCGGATTTTACTCAAACGCCGGGTAAACGCCGCAGCGCCGTGGTCGAATTTGGTTTGCCTTATGTCGCCGATCCCG CGGTGAGCAAACACGTGGCCGAGTTTTTATCTCAGCACCAACAAGTCTCTCACGCTGCGTTAGGACAATCAGAAAGTGAT CAACCCGCCATTCCGGTAGGTCTGTTGTTGAACGGCGGCGTGTTTAACAGTGACCTCGTCACTGCGCGGATGACCGAGTT GCTCGGTCGCTGGCGCGGCGCACCGGTCACCGTCCTTGATAACCCGCATCCAGATTGGTCTGTGGCATTAGGCGCTGTCG CGTTTGCCAAAGCCCGTCGAGGGGCACAACTCAAAATCGGTGGCGGTTCTGCTCGGTCTTACTTTTTGCATCTGCAAGAA AAAAACAAAATGGGTAAAGCGCTCTGTTTGCTTGCAAAAGGCACCGAAGAAGGACAAGAAATTCGTCTCACTGGACGACG TTTCTCGCTCACCCTTGGCGAACCCGTACGCTTTAACCTACTCACGTCAACGCACGATGCTTTGTCCCACCACGTAGCGA TTCAAAACGGCGTCATGGCGGATATCGACCCTGATATCTTCACCCCACTTCCCCCGTATATCGTTACATTGCAAGGGGAA GGCGCAGAATTAGAAGCCAATCAAAAAGAGCGTGTGGAAGTTCAACTTGCATGCCAATTGACCGAAGTCGGCACCCTGAA AATGGAGTGCGTCAGTGTCGAAGAAGAAGATAAACGTTGGGCTCTGGAGTTTGAAGTTCGCAACAAAAAAGCGGAAGAAC AAGAAAATGCCACACTTCACCCACGATTGAATGAGTGTAAAGAACTGATTACCCGCCTCTATAGTGGCAACAAAAAAAGT GGCGATGGCAATGAGATCAAACTGTTAGCCAAAGAACTTGAACGCAAACTTGGCAAGCGCGATGAATGGGACTTCACAAC CCTACGCCACTTGTTTGATGCCTTTGCACAAGGACGAAAACGTCGCCGCCGTTCTGAACAACACGAAAAAAACTGGCTAC GTTTAGCAGGTTTTTCTCTTCGCCCGGGCTTTGGCGATGCAACCGATTCTTGGCGTATTGAGCAAGTTTGGGGGCTCTAC CAACAAGGTATCCAGTTCCAAAATCATCAAGGTTGGACCGATTGGTGGGTATTCTGGCGTCGTATAGCTGGAGGCTTAAA CCAAGAGCAACAAGAAACGCTACTTGCCGACATTGCCAAGTATTTACACCCAGGCGCGATGAAAAATCCACAAACGGCAA AAGCCGCGCAAGATATGGGCTACGAAGCCATGGTTCGACTGGCCGCGTCTCTAGAGCATCTGGAAGTGGAAGACAAAGTT TTGCTAACCAGTTGGTTTTTGAGCAAAGCTCTGAATCAAAACCAATTTGAGCAAGCGCACTGGTGGGCGATTGGGCGATT GGCCTCTCGTACACCGCTCTACGCAAGCCAACATCGTGTCATTCCACGCGAGCAAGCGGAACAATGGTTACCGAAACTAT TGGATCAGAACTGGCAGAAAGAACCGATGATCGCCTTTGCTGCGGTGATGATTTGTCGTAAAACGGGTGATCGTCTCTTT GATATCTCTGAAGATTTCCGCCAACAAGTGCTCACCAAACTGAAGCAAAGCCGAGTACCGGAAGCGTGGGTAAGCTTGGT CGAAGAGATCAAAGAGCTTTCTGAAAGCGAGTCTAAACGCGTGTTTGGTGATGCTCTCCCGAGCGGGTTGCGTCTGGTGA CTCAGTAA
Upstream 100 bases:
>100_bases GTGGAATTCGACGTGCGTGACGATGCCTCTCTGGCAGAATAATCGAACAAAGCAAACGGCATCCGAAGGGTGCCGTTTTT AAATCAATCAAGGGTTTGTC
Downstream 100 bases:
>100_bases ACCGTCATTAGCGAACCTCCTAATCAGCCAGCCTCATGCTGGCTGATTGTTTTTCATCGTGCACCAACCAATTAGCATCG CCCTTTCTTTGCCTGTCCCG
Product: DnaK-like protein
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 935; Mature: 934
Protein sequence:
>935_residues MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVA GDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVGDVEKVSPVIASASYLNHIRQAWNHRHPGNLL EDQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSG SKLLGGTKSISLNKQEVHQIALDGFFPLSDFTQTPGKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESD QPAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGE GAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKS GDGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKV LLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLF DISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ
Sequences:
>Translated_935_residues MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVA GDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVGDVEKVSPVIASASYLNHIRQAWNHRHPGNLL EDQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSG SKLLGGTKSISLNKQEVHQIALDGFFPLSDFTQTPGKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESD QPAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGE GAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKS GDGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKV LLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLF DISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ >Mature_934_residues ASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHPANGQIAPADLTLPWENQTVAG DIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHSDILPWAGVGDVEKVSPVIASASYLNHIRQAWNHRHPGNLLE DQEVVVTVPASFDETARKLTLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIEA KFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAKEQLLSSTAPEEVKITMLGSGS KLLGGTKSISLNKQEVHQIALDGFFPLSDFTQTPGKRRSAVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQ PAIPVGLLLNGGVFNSDLVTARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQEK NKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMADIDPDIFTPLPPYIVTLQGEG AELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRWALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSG DGNEIKLLAKELERKLGKRDEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLYQ QGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMGYEAMVRLAASLEHLEVEDKVL LTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRVIPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFD ISEDFRQQVLTKLKQSRVPEAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320950, Length=336, Percent_Identity=24.702380952381, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 104396; Mature: 104265
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCEECC ANGQIAPADLTLPWENQTVAGDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHS CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC DILPWAGVGDVEKVSPVIASASYLNHIRQAWNHRHPGNLLEDQEVVVTVPASFDETARKL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH TLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE HHHHHHHCCCHHEEEECCCHHHHHHHHHHHCHHHHHHHHHCCEEEEEECCCCCCCHHHHH AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAK HHCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHH EQLLSSTAPEEVKITMLGSGSKLLGGTKSISLNKQEVHQIALDGFFPLSDFTQTPGKRRS HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHH AVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQPAIPVGLLLNGGVFNSDLV HHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH TARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHH KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMA HCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCEEE DIDPDIFTPLPPYIVTLQGEGAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRW CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEEECCCCCCCEE ALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSGDGNEIKLLAKELERKLGKR EEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC DEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMG HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC YEAMVRLAASLEHLEVEDKVLLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFDISEDFRQQVLTKLKQSRVP CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCC EAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure ASPRYLVGIDLGTTNTVVAFCELTENLQQSNVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCEECC ANGQIAPADLTLPWENQTVAGDIANVIIGEWARELGAKVEGRQVSSAKSWLSHQAVDRHS CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC DILPWAGVGDVEKVSPVIASASYLNHIRQAWNHRHPGNLLEDQEVVVTVPASFDETARKL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH TLEAAQLAGLSQVLLLEEPQAVCYDWYARHQHSAAELLKEIPLILVCDVGGGTTDLSLIE HHHHHHHCCCHHEEEECCCHHHHHHHHHHHCHHHHHHHHHCCEEEEEECCCCCCCHHHHH AKFNQDALALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQSKKLNAASLTKLIQQTRKAK HHCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHH EQLLSSTAPEEVKITMLGSGSKLLGGTKSISLNKQEVHQIALDGFFPLSDFTQTPGKRRS HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHH AVVEFGLPYVADPAVSKHVAEFLSQHQQVSHAALGQSESDQPAIPVGLLLNGGVFNSDLV HHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHH TARMTELLGRWRGAPVTVLDNPHPDWSVALGAVAFAKARRGAQLKIGGGSARSYFLHLQE HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHH KNKMGKALCLLAKGTEEGQEIRLTGRRFSLTLGEPVRFNLLTSTHDALSHHVAIQNGVMA HCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCEEE DIDPDIFTPLPPYIVTLQGEGAELEANQKERVEVQLACQLTEVGTLKMECVSVEEEDKRW CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHCCCEEEEEECCCCCCCEE ALEFEVRNKKAEEQENATLHPRLNECKELITRLYSGNKKSGDGNEIKLLAKELERKLGKR EEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC DEWDFTTLRHLFDAFAQGRKRRRRSEQHEKNWLRLAGFSLRPGFGDATDSWRIEQVWGLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHH QQGIQFQNHQGWTDWWVFWRRIAGGLNQEQQETLLADIAKYLHPGAMKNPQTAKAAQDMG HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC YEAMVRLAASLEHLEVEDKVLLTSWFLSKALNQNQFEQAHWWAIGRLASRTPLYASQHRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPREQAEQWLPKLLDQNWQKEPMIAFAAVMICRKTGDRLFDISEDFRQQVLTKLKQSRVP CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCC EAWVSLVEEIKELSESESKRVFGDALPSGLRLVTQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]