| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365608
Identifier: 27365608
GI number: 27365608
Start: 2306794
End: 2307753
Strand: Reverse
Name: 27365608
Synonym: VV1_2286
Alternate gene names: NA
Gene position: 2307753-2306794 (Counterclockwise)
Preceding gene: 27365610
Following gene: 27365607
Centisome position: 70.32
GC content: 47.08
Gene sequence:
>960_bases ATGAATGGACTAACTAAATCTGCAATTTCTTCTGTCGCGGCAGCGCTACTCTTAGCTGGCTGCGGTGGTAGTGACGGAGG CAAAACCGCCAATGTCTCTTTTTATGTGTCTGATGCACCCGTTGACAGTGCTCAGTCCGTCTCCGTGGGCTTCACTCAGG TTGAGTTAGTGGATAACGAAGGCAACTCTGTTTTCCTTGACGTCGTACCTTCTACTGGCGCGGATTACCAAAAAATTGAC TTGCTTGATTACCAAGGCACCGACTCCGTATTGATGGTCAGCACGCAACCGGTCCCTGTAGGCAGCTATAAAGAGCTGAT ACTGCATGTGACGAATGAAAATGGGGTCAATTACGTGATTGATGAAAATGGCCAACAACCTTTGAAACAACCGAGCAACA AGTTGAAGTTAGGCAGTTTCGATGTCACTTCTGAGGCCGTACAGCTCTACACTATTGAGTTTGACCTTCGCCAGTCTTTA GTGATGCGCGGCAATTTAGGCAGCAACAATGGCTACATTCTTAAGCCTCATGGTGTCTCTATTGTTTCTAATGCTTCCGC AGTGAGTATCTCAGTGAATGTCGATGATAACCTTCTGACAGGGGACGAAAGTTGCACGGCTGACAGCCAAGCATTTATCT ATCTCTATGAAGGTGAGGGACACGATAGCGCCAATCTCATCGATTTGGTGGATGAAGATGACCCGGAATTCGACAGTCAG AATCCTGTCCCAGAAAACGCGGTAAAACCCATTGCATCGGCAGGTTTGGATGAAAACAATAACTACGCATTTGGTTTCCT AAATGCAGGGACTTATACCGTTGCATTCAGTTGTAACGCTGGGGATGACAACCCCATTCAATATGATGGTACCGCAATTC CATTACCCACAGGGCAAGTCGGCACCATCACGTTAGCAGCAGGAGAAAATGGCACAATTGACTTTGTACCAGCCCCATAA
Upstream 100 bases:
>100_bases AATTGACAAAATGCTTGCACACGCCTAACGCAGTGAACATTCGCGTTCAAAAATAACGACTATAATTGATAGTATCATCA GTTGTAATGAGATATGTGTA
Downstream 100 bases:
>100_bases ACCGGATCATTGCTGAATTAACCGTGACTTAGTGCGAATAAGTCACGGTTTTTCTTTTTGTTGGCAACATCTCCCACCAA CAACGCTTGTTTCCCCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MNGLTKSAISSVAAALLLAGCGGSDGGKTANVSFYVSDAPVDSAQSVSVGFTQVELVDNEGNSVFLDVVPSTGADYQKID LLDYQGTDSVLMVSTQPVPVGSYKELILHVTNENGVNYVIDENGQQPLKQPSNKLKLGSFDVTSEAVQLYTIEFDLRQSL VMRGNLGSNNGYILKPHGVSIVSNASAVSISVNVDDNLLTGDESCTADSQAFIYLYEGEGHDSANLIDLVDEDDPEFDSQ NPVPENAVKPIASAGLDENNNYAFGFLNAGTYTVAFSCNAGDDNPIQYDGTAIPLPTGQVGTITLAAGENGTIDFVPAP
Sequences:
>Translated_319_residues MNGLTKSAISSVAAALLLAGCGGSDGGKTANVSFYVSDAPVDSAQSVSVGFTQVELVDNEGNSVFLDVVPSTGADYQKID LLDYQGTDSVLMVSTQPVPVGSYKELILHVTNENGVNYVIDENGQQPLKQPSNKLKLGSFDVTSEAVQLYTIEFDLRQSL VMRGNLGSNNGYILKPHGVSIVSNASAVSISVNVDDNLLTGDESCTADSQAFIYLYEGEGHDSANLIDLVDEDDPEFDSQ NPVPENAVKPIASAGLDENNNYAFGFLNAGTYTVAFSCNAGDDNPIQYDGTAIPLPTGQVGTITLAAGENGTIDFVPAP >Mature_319_residues MNGLTKSAISSVAAALLLAGCGGSDGGKTANVSFYVSDAPVDSAQSVSVGFTQVELVDNEGNSVFLDVVPSTGADYQKID LLDYQGTDSVLMVSTQPVPVGSYKELILHVTNENGVNYVIDENGQQPLKQPSNKLKLGSFDVTSEAVQLYTIEFDLRQSL VMRGNLGSNNGYILKPHGVSIVSNASAVSISVNVDDNLLTGDESCTADSQAFIYLYEGEGHDSANLIDLVDEDDPEFDSQ NPVPENAVKPIASAGLDENNNYAFGFLNAGTYTVAFSCNAGDDNPIQYDGTAIPLPTGQVGTITLAAGENGTIDFVPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33450; Mature: 33450
Theoretical pI: Translated: 3.69; Mature: 3.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLTKSAISSVAAALLLAGCGGSDGGKTANVSFYVSDAPVDSAQSVSVGFTQVELVDNE CCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCEEEECEEEEEEEECC GNSVFLDVVPSTGADYQKIDLLDYQGTDSVLMVSTQPVPVGSYKELILHVTNENGVNYVI CCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEE DENGQQPLKQPSNKLKLGSFDVTSEAVQLYTIEFDLRQSLVMRGNLGSNNGYILKPHGVS CCCCCCHHHCCCCCEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEECCCCCE IVSNASAVSISVNVDDNLLTGDESCTADSQAFIYLYEGEGHDSANLIDLVDEDDPEFDSQ EEECCEEEEEEEECCCCEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCC NPVPENAVKPIASAGLDENNNYAFGFLNAGTYTVAFSCNAGDDNPIQYDGTAIPLPTGQV CCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEECCEEEECCCCCC GTITLAAGENGTIDFVPAP EEEEEECCCCCCEEEEECC >Mature Secondary Structure MNGLTKSAISSVAAALLLAGCGGSDGGKTANVSFYVSDAPVDSAQSVSVGFTQVELVDNE CCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCEEEECEEEEEEEECC GNSVFLDVVPSTGADYQKIDLLDYQGTDSVLMVSTQPVPVGSYKELILHVTNENGVNYVI CCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEE DENGQQPLKQPSNKLKLGSFDVTSEAVQLYTIEFDLRQSLVMRGNLGSNNGYILKPHGVS CCCCCCHHHCCCCCEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCEEECCCCCE IVSNASAVSISVNVDDNLLTGDESCTADSQAFIYLYEGEGHDSANLIDLVDEDDPEFDSQ EEECCEEEEEEEECCCCEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCC NPVPENAVKPIASAGLDENNNYAFGFLNAGTYTVAFSCNAGDDNPIQYDGTAIPLPTGQV CCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCEEECCEEEECCCCCC GTITLAAGENGTIDFVPAP EEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA