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The map label for this gene is 27365602

Identifier: 27365602

GI number: 27365602

Start: 2297781

End: 2298659

Strand: Reverse

Name: 27365602

Synonym: VV1_2279

Alternate gene names: NA

Gene position: 2298659-2297781 (Counterclockwise)

Preceding gene: 27365607

Following gene: 27365601

Centisome position: 70.04

GC content: 48.24

Gene sequence:

>879_bases
ATGCTCATCAAAGTTATTAACATTTTATTCCCCGTTTTTGCCTTAGCTGGCGTCGGCTTTTTGGTTGGGCATTATTTGAA
ACCTGACTTTAAGCCGATTAACCGCATCAATATTGACGTTTTCCTACCTGCTTTGGTGTTTTCATCTCTCACCACCATGC
CGCTAGACACCCAGCAGCTCCCTTTGATATGGGCATCGCTTGTGGCGGTATTGCTGCCGGGGCTACTGATGATACCCATT
TGCAAACTGGCTGGGCTCTCTTTTAAGACCTGGGCACCGCCGCATATGTTTCGCAACAGTGGCAATCTTGCCATTCCTCT
CTTTGCCTACGCATTTGGCGACGCGGCACAGTCAAGCGCCGTACTGCTTTTCGTTATGTCATCTTGCATTCACATTAGCT
TAGGCATTGCGCTGTTGAGCCGAGGCGGATCACTCTTACAAATGGTCAAAATGCCTGTGTTTATTGCCGCGTCTGTGGCT
GTGTTTTTTAATCTCAACCATGTTGCCGTTTGGTCACCGCTGATTGAAGCCACCTCCTTGCTAGGTCAAGCCGCAGTGCC
AGTCATGCTCCTTTCTCTTGGGGCACAAATGACCCATTTGAAATGGTCCGGCCTCAGCGTTGGGCTCTACTCAACGCTCC
AATCTATCGCAACAGGAGCGATAGCATTTGCGGTGATTTACTTCTTTATCCCCCTTCCCCCGCTGCAAATGAAAATGATG
GTCCTGTTCACCATGTTGCCAGCGGCGGTGATGAATTATCTTTTTGCCGAACGTTTTCATATCGAACCCGAGAAAGTGGC
CTCAATTGTATTATTCGGCAATTTTTTCAGCATCTTAACCCTACCTGTGTTGCTTGGATTTGCCCTCTCTTTAACGTGA

Upstream 100 bases:

>100_bases
CTCATAGCGCGGTGGTGAGCTCATGTTTTTCAACCAGTTTAGGTGACGAAAAACACATCACCTGATAGCGTAAAAACAAA
TCCTCTTCAGGAACGTCAAC

Downstream 100 bases:

>100_bases
TGATGAATTTATTTCATCATTCGTTTTAGAGTTGAAATATTCCTTAAATATTCTATGGATATATTTATTAATATGATAGA
AAGCGGATTCATCATCACAA

Product: membrane protein

Products: NA

Alternate protein names: Auxin Efflux Carrier Family Protein; Permease; Transporter AEC Family; Malonate Transporter; Malonate Efflux Carrier; Malonate Efflux Carrier Protein; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Superfamily; Auxin Efflux Carrier Family Transporter; Auxin Efflux Carrier Protein; Membrane Transport Family

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLIKVINILFPVFALAGVGFLVGHYLKPDFKPINRINIDVFLPALVFSSLTTMPLDTQQLPLIWASLVAVLLPGLLMIPI
CKLAGLSFKTWAPPHMFRNSGNLAIPLFAYAFGDAAQSSAVLLFVMSSCIHISLGIALLSRGGSLLQMVKMPVFIAASVA
VFFNLNHVAVWSPLIEATSLLGQAAVPVMLLSLGAQMTHLKWSGLSVGLYSTLQSIATGAIAFAVIYFFIPLPPLQMKMM
VLFTMLPAAVMNYLFAERFHIEPEKVASIVLFGNFFSILTLPVLLGFALSLT

Sequences:

>Translated_292_residues
MLIKVINILFPVFALAGVGFLVGHYLKPDFKPINRINIDVFLPALVFSSLTTMPLDTQQLPLIWASLVAVLLPGLLMIPI
CKLAGLSFKTWAPPHMFRNSGNLAIPLFAYAFGDAAQSSAVLLFVMSSCIHISLGIALLSRGGSLLQMVKMPVFIAASVA
VFFNLNHVAVWSPLIEATSLLGQAAVPVMLLSLGAQMTHLKWSGLSVGLYSTLQSIATGAIAFAVIYFFIPLPPLQMKMM
VLFTMLPAAVMNYLFAERFHIEPEKVASIVLFGNFFSILTLPVLLGFALSLT
>Mature_292_residues
MLIKVINILFPVFALAGVGFLVGHYLKPDFKPINRINIDVFLPALVFSSLTTMPLDTQQLPLIWASLVAVLLPGLLMIPI
CKLAGLSFKTWAPPHMFRNSGNLAIPLFAYAFGDAAQSSAVLLFVMSSCIHISLGIALLSRGGSLLQMVKMPVFIAASVA
VFFNLNHVAVWSPLIEATSLLGQAAVPVMLLSLGAQMTHLKWSGLSVGLYSTLQSIATGAIAFAVIYFFIPLPPLQMKMM
VLFTMLPAAVMNYLFAERFHIEPEKVASIVLFGNFFSILTLPVLLGFALSLT

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31641; Mature: 31641

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKVINILFPVFALAGVGFLVGHYLKPDFKPINRINIDVFLPALVFSSLTTMPLDTQQL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHH
PLIWASLVAVLLPGLLMIPICKLAGLSFKTWAPPHMFRNSGNLAIPLFAYAFGDAAQSSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCHH
VLLFVMSSCIHISLGIALLSRGGSLLQMVKMPVFIAASVAVFFNLNHVAVWSPLIEATSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGQAAVPVMLLSLGAQMTHLKWSGLSVGLYSTLQSIATGAIAFAVIYFFIPLPPLQMKMM
HHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLFTMLPAAVMNYLFAERFHIEPEKVASIVLFGNFFSILTLPVLLGFALSLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIKVINILFPVFALAGVGFLVGHYLKPDFKPINRINIDVFLPALVFSSLTTMPLDTQQL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHH
PLIWASLVAVLLPGLLMIPICKLAGLSFKTWAPPHMFRNSGNLAIPLFAYAFGDAAQSSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCCCCCHH
VLLFVMSSCIHISLGIALLSRGGSLLQMVKMPVFIAASVAVFFNLNHVAVWSPLIEATSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGQAAVPVMLLSLGAQMTHLKWSGLSVGLYSTLQSIATGAIAFAVIYFFIPLPPLQMKMM
HHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLFTMLPAAVMNYLFAERFHIEPEKVASIVLFGNFFSILTLPVLLGFALSLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA