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The map label for this gene is ychG [H]

Identifier: 27365560

GI number: 27365560

Start: 2247521

End: 2248858

Strand: Reverse

Name: ychG [H]

Synonym: VV1_2235

Alternate gene names: 27365560

Gene position: 2248858-2247521 (Counterclockwise)

Preceding gene: 27365566

Following gene: 27365557

Centisome position: 68.52

GC content: 45.67

Gene sequence:

>1338_bases
ATGTCTATCCAAAACTATTTTGCTGACTTTCTTGAAGAGAGTCCTGTTGATGTCGCTCAGCTCACCACTTTCTCTGAGCA
TATTCCTGATGAGTGGGTTGCTAAAGCGGCAACACTTTCCGATAAAGCGACAATTCGTCGACGTCGTTTACCTAGTGATA
TGGTTCTTTGGCTTATTGTTGGAATGGCGTTTTTCCGCAATGAGTCTATTGCAGAAGTCGCACGGCGAATGAATGTCTGT
GCCGAGGGCTTAGCCGATGAGGAACTGCTAGCTAAAAGTGCTTTAACGCAAGCAAGGCAACGCCTTGGTAAAGCTGCTCC
AGAATGGTTGTTTAGACAATGCAGTCACACATGGGGTCTAGAGCGTTACCCCGAGGATACTTGGCAAGGCTTACAAGTCT
TCGCTATTGATGGGGCTCTTTTTCGAACCGCTGATACATCAGAACTAAGAGAACATTTTGGGTCAGGTAATACATCCAGC
GAGAGGCAGACACCTCATCCAGTACTCAGGGTGGTGACCATGATGAATGTTCGCTCACATGTCATTGTAGACGCAGCTAT
AAGCCCCTATCGTCGTGGTGAAATACCGCTTGCAATGCCCTTTATTGACTCTCTACCTGATAACTCATTGACTTTACTAG
ATAAGAGGTTTTATGGCGCAGACTTACTTCTTTCTCTCCAAAATAGTGGCTCCAACAGGCATTGGTTGTTACCAGCGAAG
AAAGGGGTGAAATTCAGACTTCTGGACGATGAAGAGAGCGACGACATGTTGGTAGAAATGAAAGTCTCTCCACAGGCTCG
CAAGAAAAATCCTAACCTACCTGAAAAATGGCAAGTCAGAGCCGTTACTTATCAAGTACAAGGTAAGCACAAAACAGTGT
TTACGTCTTTGCCTAGGGAAGAGTACGATGCGGAATCAGTAGCCGAGCTTTACCATGAGAGATGGGAAATTGAGTTAGGG
TACAGAGACATAAAAAGTTCGATGCAGCACAACGCGTTAGTGCTGAGGAGTAAGACGGTCGAGCTTGTCTATCAAGAGTT
ATGGGGGCTGTTGCTTGGTTATAACTTGGTAAGACGAGAAGCCAGTCAAGCGGCCGTAGCACATGGTCGAATGGCCAATG
AAATCAGTTTTAAATACGCTTGTCAGTTCATCGCTAGTCAACTGAAAGTAATGAGCAAAGCGGTATCTCCAGGTAATACA
CCGAAGCGTCTAAAAAGTCTGCGCGGAGACTTATCCATCCTTTTTATAGACAAACGCCCTAAGCCAAATCGGCCTAGGGC
GGTAAAAATATCAAAGACCCGATATCCTGTTAATCGCAAGGCAGCTCCTCTTAAGTGA

Upstream 100 bases:

>100_bases
AAACCCAATCAATTGGCAATGTAGATCAGATAAGGATCGGTTGACCGATCCTTCTGATGAGAGACAATCGGAAACCTGTT
TATAGGTTTCCGATTTTTTT

Downstream 100 bases:

>100_bases
ACTACATTGCCACAACTGTGGAGCTTTTTATCAATTATTGCTAAGCAACTTCGCATTACACTTTTAAATGGTGCTTACCA
TGAGATACTTTCGCCTTTAA

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSIQNYFADFLEESPVDVAQLTTFSEHIPDEWVAKAATLSDKATIRRRRLPSDMVLWLIVGMAFFRNESIAEVARRMNVC
AEGLADEELLAKSALTQARQRLGKAAPEWLFRQCSHTWGLERYPEDTWQGLQVFAIDGALFRTADTSELREHFGSGNTSS
ERQTPHPVLRVVTMMNVRSHVIVDAAISPYRRGEIPLAMPFIDSLPDNSLTLLDKRFYGADLLLSLQNSGSNRHWLLPAK
KGVKFRLLDDEESDDMLVEMKVSPQARKKNPNLPEKWQVRAVTYQVQGKHKTVFTSLPREEYDAESVAELYHERWEIELG
YRDIKSSMQHNALVLRSKTVELVYQELWGLLLGYNLVRREASQAAVAHGRMANEISFKYACQFIASQLKVMSKAVSPGNT
PKRLKSLRGDLSILFIDKRPKPNRPRAVKISKTRYPVNRKAAPLK

Sequences:

>Translated_445_residues
MSIQNYFADFLEESPVDVAQLTTFSEHIPDEWVAKAATLSDKATIRRRRLPSDMVLWLIVGMAFFRNESIAEVARRMNVC
AEGLADEELLAKSALTQARQRLGKAAPEWLFRQCSHTWGLERYPEDTWQGLQVFAIDGALFRTADTSELREHFGSGNTSS
ERQTPHPVLRVVTMMNVRSHVIVDAAISPYRRGEIPLAMPFIDSLPDNSLTLLDKRFYGADLLLSLQNSGSNRHWLLPAK
KGVKFRLLDDEESDDMLVEMKVSPQARKKNPNLPEKWQVRAVTYQVQGKHKTVFTSLPREEYDAESVAELYHERWEIELG
YRDIKSSMQHNALVLRSKTVELVYQELWGLLLGYNLVRREASQAAVAHGRMANEISFKYACQFIASQLKVMSKAVSPGNT
PKRLKSLRGDLSILFIDKRPKPNRPRAVKISKTRYPVNRKAAPLK
>Mature_444_residues
SIQNYFADFLEESPVDVAQLTTFSEHIPDEWVAKAATLSDKATIRRRRLPSDMVLWLIVGMAFFRNESIAEVARRMNVCA
EGLADEELLAKSALTQARQRLGKAAPEWLFRQCSHTWGLERYPEDTWQGLQVFAIDGALFRTADTSELREHFGSGNTSSE
RQTPHPVLRVVTMMNVRSHVIVDAAISPYRRGEIPLAMPFIDSLPDNSLTLLDKRFYGADLLLSLQNSGSNRHWLLPAKK
GVKFRLLDDEESDDMLVEMKVSPQARKKNPNLPEKWQVRAVTYQVQGKHKTVFTSLPREEYDAESVAELYHERWEIELGY
RDIKSSMQHNALVLRSKTVELVYQELWGLLLGYNLVRREASQAAVAHGRMANEISFKYACQFIASQLKVMSKAVSPGNTP
KRLKSLRGDLSILFIDKRPKPNRPRAVKISKTRYPVNRKAAPLK

Specific function: Involved in the transposition of the insertion sequence is4 [C]

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790729, Length=424, Percent_Identity=35.8490566037736, Blast_Score=255, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 50753; Mature: 50622

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQNYFADFLEESPVDVAQLTTFSEHIPDEWVAKAATLSDKATIRRRRLPSDMVLWLIV
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
GMAFFRNESIAEVARRMNVCAEGLADEELLAKSALTQARQRLGKAAPEWLFRQCSHTWGL
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
ERYPEDTWQGLQVFAIDGALFRTADTSELREHFGSGNTSSERQTPHPVLRVVTMMNVRSH
CCCCCHHHCCEEEEEECCHHEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VIVDAAISPYRRGEIPLAMPFIDSLPDNSLTLLDKRFYGADLLLSLQNSGSNRHWLLPAK
EEEECCCCCCCCCCCCEECHHHHCCCCCCEEHHHHHHCCCEEEEEEECCCCCCEEEEECC
KGVKFRLLDDEESDDMLVEMKVSPQARKKNPNLPEKWQVRAVTYQVQGKHKTVFTSLPRE
CCCEEEEECCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCH
EYDAESVAELYHERWEIELGYRDIKSSMQHNALVLRSKTVELVYQELWGLLLGYNLVRRE
HCCHHHHHHHHHHHCEEEECHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
ASQAAVAHGRMANEISFKYACQFIASQLKVMSKAVSPGNTPKRLKSLRGDLSILFIDKRP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCC
KPNRPRAVKISKTRYPVNRKAAPLK
CCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SIQNYFADFLEESPVDVAQLTTFSEHIPDEWVAKAATLSDKATIRRRRLPSDMVLWLIV
CHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
GMAFFRNESIAEVARRMNVCAEGLADEELLAKSALTQARQRLGKAAPEWLFRQCSHTWGL
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
ERYPEDTWQGLQVFAIDGALFRTADTSELREHFGSGNTSSERQTPHPVLRVVTMMNVRSH
CCCCCHHHCCEEEEEECCHHEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VIVDAAISPYRRGEIPLAMPFIDSLPDNSLTLLDKRFYGADLLLSLQNSGSNRHWLLPAK
EEEECCCCCCCCCCCCEECHHHHCCCCCCEEHHHHHHCCCEEEEEEECCCCCCEEEEECC
KGVKFRLLDDEESDDMLVEMKVSPQARKKNPNLPEKWQVRAVTYQVQGKHKTVFTSLPRE
CCCEEEEECCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCH
EYDAESVAELYHERWEIELGYRDIKSSMQHNALVLRSKTVELVYQELWGLLLGYNLVRRE
HCCHHHHHHHHHHHCEEEECHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
ASQAAVAHGRMANEISFKYACQFIASQLKVMSKAVSPGNTPKRLKSLRGDLSILFIDKRP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCC
KPNRPRAVKISKTRYPVNRKAAPLK
CCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7773397; 8905232; 9097039; 9278503 [H]