Click here to switch to the map view.

The map label for this gene is 27365318

Identifier: 27365318

GI number: 27365318

Start: 1963104

End: 1963835

Strand: Reverse

Name: 27365318

Synonym: VV1_1973

Alternate gene names: NA

Gene position: 1963835-1963104 (Counterclockwise)

Preceding gene: 27365319

Following gene: 27365317

Centisome position: 59.84

GC content: 44.95

Gene sequence:

>732_bases
ATGGATGATTTAGAATTTCGTCGCCGTATTTTGTCGGACCCGAAAAGCCGTGACGAAGAAGTTTTGCAAGCGCTCAACAG
CAGCGATTCCAATGCAAAATTTGCTGAAGATGTGCTGGATTTGGATGCGCAAATCAAACAAGCAATGAAAGTGGATGTGC
CTGAAGAGCTTGTTGACAAAATCTTGTTTAAACAAACGTCTTACGCGAGTGATGATAAAATTGTCAGACCAAATTTCGTC
CGTAAAGCAATGGCGCTAGCCGCTTCATTTGCCTTCACTGCAGGCCTATTGGTCGGTCAAATTAACTGGGGTAACCTCAT
TGTGCCACCTGCACAAGCAAGCTTGGCAGATACGGCAATGAAACACGTGGTCGCAGAAAGTGGCTTTGTGCGACACATCG
ATGAGCAAGTGACCTCCGTACAGATCAACGCCAAATTATCGCCACTGGATTACTACTTTGATGCAAACTTCCCATACCAC
GTTTATTACCTGAATCACTGTGGTTTTGGCCATGCCAATGCATTGCATATGATTTTCCAGGGAGATAAAGGCAAGATCAC
GCTGTTTATCGCCCCAATTAAGAGCCCAGCAGAAGCTGATTTCGCCAAAGACGGGATGAATGGCATTATCGTTCCTATTG
GTGATACCAGCTTGATCTTGGTGGGAGAAAATGGCGAAGACACCAAGAAATTTGCTGAAAAACTCGCACCTATGATTAAA
CCTCTCGTTTAG

Upstream 100 bases:

>100_bases
CTTGATCTCAATAAAAATACGGTAATGACACGTCTGTTTCGCGCAAGAAATCAGTTGAAAGAGCTGTTAGACTCAGACCA
AACTCAAAGGGGGCAAAAAA

Downstream 100 bases:

>100_bases
TCAGCATTTCGCCGACAAAAGCCGCAAGTTACTGCTAACTTGCGGCTTTTTACATTATTAATCCTCACAGAACCATTCAC
CAAACTCATATCGGTAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV
RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLDYYFDANFPYH
VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK
PLV

Sequences:

>Translated_243_residues
MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV
RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLDYYFDANFPYH
VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK
PLV
>Mature_243_residues
MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV
RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLDYYFDANFPYH
VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK
PLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26814; Mature: 26814

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDK
CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILFKQTSYASDDKIVRPNFVRKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAM
HHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHH
KHVVAESGFVRHIDEQVTSVQINAKLSPLDYYFDANFPYHVYYLNHCGFGHANALHMIFQ
HHHHHHCCHHHHHHHHHHEEEEEEEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEE
GDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK
CCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH
PLV
CCC
>Mature Secondary Structure
MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDK
CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ILFKQTSYASDDKIVRPNFVRKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAM
HHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHH
KHVVAESGFVRHIDEQVTSVQINAKLSPLDYYFDANFPYHVYYLNHCGFGHANALHMIFQ
HHHHHHCCHHHHHHHHHHEEEEEEEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEE
GDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK
CCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH
PLV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA