| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365091
Identifier: 27365091
GI number: 27365091
Start: 1718741
End: 1721089
Strand: Reverse
Name: 27365091
Synonym: VV1_1731
Alternate gene names: NA
Gene position: 1721089-1718741 (Counterclockwise)
Preceding gene: 27365099
Following gene: 27365089
Centisome position: 52.44
GC content: 45.76
Gene sequence:
>2349_bases ATGGAACAAGCTGAAATTCTCTCAATCGCAGAAAGGCTTATCCCGGTTTATCACGCGGAAGACTTTGATTTTGTCCTTGG TCAATTGACCGAAGGCTACCCTCCTTCCGCTAAATTACTGGTAAAAATGGAATTAAATCGTGTGATGGCGCCTTGCAAAA AGAGCATCGACTTGCGAGGCCGAGTACAGGGCGATTGTCGAGAATACGAAATTGACGGTATCAAACATTGGTTTGATGAT GTCGCCTTTAATGCTTACTACAAAAACACGCGCAAATTTGGTGGCTATACCGAAGGCGTTTGGGAAGCGTTAATTAACAC ACGCAACAGTTTCCGCGCCTTAGGCAAAGGCGGCCAACCGGCCAGCAGCCAAGGGCTGAGTGATGCCAGCAGTCCATTTG AGGCCGAGGCAGTCCATCTTGGTTACGATCTCAAACGCCAAGAAAAGCGGCTCAGAGTGCACTCTCAAGTCGACATTACG TTATCAAAAGGGCAATTGCTCCACGGCGTCAGCGTTGATCTTTCCGCTTCTGGTGCGAAGTTCAAAGTACCGAGTGCATT TAACTACAGCCTTGGCGAAGTGATTCAAATTACCTTTAGTGAACTGGCCAAAACCTCGCAAATTGCTCACGTTGATAAGC CGATTGAATACCGTGTTTTGGCTGTTGAAGATTCTTATGAAAACGATGCAGTTAAATTTCTTCGTTGCTTACGCCTGACA GACACCAATGTTGTCTCAAGAGTGATCGATGAGTCTTTAAATAGCTCAGCCAAACGTGCCCGACACGATAACCAAGACAA AATTATTCGAGCAAGAACGCGGGGCTACGAGCATATTTATCTAAAGCACACTTGTAACTTACCGCTGTTTTTCCAAGGCG ATGAGCTCAAGCTCGCGATGCTCACGCCAAACAATATGCCGATTTGGCAATACTGGCATGATGAACGAAATCAACAGGTG TTTGGTTCACTGTTTAACTCACAGCGAATGTCGATGCTAATGCGACCGGGGCTCAAAGGTGCCAGTAACGTTATTTATGC GTTTACTCACGAACATGAAGGGAAAAACTTTTTCTACTCCATGCTCATGCCCGAGGCCACACGTGAACAAAGACAGCTGT TTTGGCATCTTGGCGCAAAACGAGCCAGTTGGCGGGCATTCCGTATTTCCATTTTTGAACTCAGTGAAAACGAACGTCAA CAACTCGGCAGCTTCTCGCAAGAATTAGCCGAAGCCTCTTCAGGGTTAACGCATTGTGGGATTTTGCAAGAAATTGCGGA CAACTCGAATGGCGCAGACTATCTCTTTACCGAAAAGCCTCGACTGCCATCAAGCACCTTAAATGCTTTTCGTCATACGC GGAAAATCATCGGCTCCCCAAAAGGGATTTTCTTTGATGCCCAGTCTCGTAGAAAAGAACCTCGCTATCGTTTTCAATCA CCGCTTACGCTGACCAAAGCAGACGGTTTGGCGATGAGAGGCAAGACGATCGATCTATCCAAGCGAGGCTTGAGTCTCAC CTTGGATGCGCCACTTGAGTTGGTGTCGTCTGAAGAGATCGAGATCAACCTACATGAACTGCAGCTCTACGATAAAAAGC TGCCATTGGACAAAATTCCTTATCGTGTGGTTCGTGTCAGCCCAGACAACAAGCAAGTGCAACTGGTGATTGATGAAAAC AGCCAAACGATGAAAACCATTGCGTTTTTCAATAGCATCATCGAACACAACCAAGACAAGCTCAAACCACAAAACGAGAT CCTACCAAGTAATGAGCTGCTCGAATCGTTGCACGGCATTTTGCTGTCCAAAATGGTCAGCACGCCAGTGTTCATCAGTA AGATGCAATCGGGCTACAGAACCAAGGCCATCGGGGTTAACTTCCCCCTAGAAAAGCATTTAATGGTATTGGCAAAGCTA GGGCACAAAGAGAATTTCTCTTTAGAACCCATCTATAAAGGCCGTTCAAATACCTTAATCGCCAATCCGACGAAACGGAT TGAAGGGGCAGAACCACACCATCACGACATTTACATCGCAGTGGCAAAATTTGGCGACAAAATCAAAGCCGTACAAACAA AGCTGACGAACGAGTTTGATAGTGTCAAAGAACGCATCCTATTTATTAAAAAAGCACAGATGTCGGGTGAGTTTTATGTG CTGAGGCTGTCCACCTCACCGATTTTCAGCCCGATGACTTCCCTGTTACAAAAAGATCTGAATGAACTTTCTCAACTCAG CATGCATCAAGCCAGCAAACTGGAAAAAGAACTGGCAACATTGGTTGGCTATTGTGAAATAGAGGAAGTGACAGAAGAGA TTTTGGTACGACTTGAACTGACAAATTAA
Upstream 100 bases:
>100_bases GACCACTGATCCGTTAAACCTCAAACAATGTGCTGTTATACTTAAGTTTATTAACACTTTGCCGATACTCTTTTAATAAG CAGCTACTTTAACAGAAAAA
Downstream 100 bases:
>100_bases GCGACTCAGTGGCGCTGGTTTGAGACAGTTTTTCTTTCGAGATAATCATGGGCAGAACGATTCTGCCCATGTTTGTATTT AACATTCTTCAGTTGTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly TapZ; Glycosyltransferase
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MEQAEILSIAERLIPVYHAEDFDFVLGQLTEGYPPSAKLLVKMELNRVMAPCKKSIDLRGRVQGDCREYEIDGIKHWFDD VAFNAYYKNTRKFGGYTEGVWEALINTRNSFRALGKGGQPASSQGLSDASSPFEAEAVHLGYDLKRQEKRLRVHSQVDIT LSKGQLLHGVSVDLSASGAKFKVPSAFNYSLGEVIQITFSELAKTSQIAHVDKPIEYRVLAVEDSYENDAVKFLRCLRLT DTNVVSRVIDESLNSSAKRARHDNQDKIIRARTRGYEHIYLKHTCNLPLFFQGDELKLAMLTPNNMPIWQYWHDERNQQV FGSLFNSQRMSMLMRPGLKGASNVIYAFTHEHEGKNFFYSMLMPEATREQRQLFWHLGAKRASWRAFRISIFELSENERQ QLGSFSQELAEASSGLTHCGILQEIADNSNGADYLFTEKPRLPSSTLNAFRHTRKIIGSPKGIFFDAQSRRKEPRYRFQS PLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLHELQLYDKKLPLDKIPYRVVRVSPDNKQVQLVIDEN SQTMKTIAFFNSIIEHNQDKLKPQNEILPSNELLESLHGILLSKMVSTPVFISKMQSGYRTKAIGVNFPLEKHLMVLAKL GHKENFSLEPIYKGRSNTLIANPTKRIEGAEPHHHDIYIAVAKFGDKIKAVQTKLTNEFDSVKERILFIKKAQMSGEFYV LRLSTSPIFSPMTSLLQKDLNELSQLSMHQASKLEKELATLVGYCEIEEVTEEILVRLELTN
Sequences:
>Translated_782_residues MEQAEILSIAERLIPVYHAEDFDFVLGQLTEGYPPSAKLLVKMELNRVMAPCKKSIDLRGRVQGDCREYEIDGIKHWFDD VAFNAYYKNTRKFGGYTEGVWEALINTRNSFRALGKGGQPASSQGLSDASSPFEAEAVHLGYDLKRQEKRLRVHSQVDIT LSKGQLLHGVSVDLSASGAKFKVPSAFNYSLGEVIQITFSELAKTSQIAHVDKPIEYRVLAVEDSYENDAVKFLRCLRLT DTNVVSRVIDESLNSSAKRARHDNQDKIIRARTRGYEHIYLKHTCNLPLFFQGDELKLAMLTPNNMPIWQYWHDERNQQV FGSLFNSQRMSMLMRPGLKGASNVIYAFTHEHEGKNFFYSMLMPEATREQRQLFWHLGAKRASWRAFRISIFELSENERQ QLGSFSQELAEASSGLTHCGILQEIADNSNGADYLFTEKPRLPSSTLNAFRHTRKIIGSPKGIFFDAQSRRKEPRYRFQS PLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLHELQLYDKKLPLDKIPYRVVRVSPDNKQVQLVIDEN SQTMKTIAFFNSIIEHNQDKLKPQNEILPSNELLESLHGILLSKMVSTPVFISKMQSGYRTKAIGVNFPLEKHLMVLAKL GHKENFSLEPIYKGRSNTLIANPTKRIEGAEPHHHDIYIAVAKFGDKIKAVQTKLTNEFDSVKERILFIKKAQMSGEFYV LRLSTSPIFSPMTSLLQKDLNELSQLSMHQASKLEKELATLVGYCEIEEVTEEILVRLELTN >Mature_782_residues MEQAEILSIAERLIPVYHAEDFDFVLGQLTEGYPPSAKLLVKMELNRVMAPCKKSIDLRGRVQGDCREYEIDGIKHWFDD VAFNAYYKNTRKFGGYTEGVWEALINTRNSFRALGKGGQPASSQGLSDASSPFEAEAVHLGYDLKRQEKRLRVHSQVDIT LSKGQLLHGVSVDLSASGAKFKVPSAFNYSLGEVIQITFSELAKTSQIAHVDKPIEYRVLAVEDSYENDAVKFLRCLRLT DTNVVSRVIDESLNSSAKRARHDNQDKIIRARTRGYEHIYLKHTCNLPLFFQGDELKLAMLTPNNMPIWQYWHDERNQQV FGSLFNSQRMSMLMRPGLKGASNVIYAFTHEHEGKNFFYSMLMPEATREQRQLFWHLGAKRASWRAFRISIFELSENERQ QLGSFSQELAEASSGLTHCGILQEIADNSNGADYLFTEKPRLPSSTLNAFRHTRKIIGSPKGIFFDAQSRRKEPRYRFQS PLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLHELQLYDKKLPLDKIPYRVVRVSPDNKQVQLVIDEN SQTMKTIAFFNSIIEHNQDKLKPQNEILPSNELLESLHGILLSKMVSTPVFISKMQSGYRTKAIGVNFPLEKHLMVLAKL GHKENFSLEPIYKGRSNTLIANPTKRIEGAEPHHHDIYIAVAKFGDKIKAVQTKLTNEFDSVKERILFIKKAQMSGEFYV LRLSTSPIFSPMTSLLQKDLNELSQLSMHQASKLEKELATLVGYCEIEEVTEEILVRLELTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89029; Mature: 89029
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAEILSIAERLIPVYHAEDFDFVLGQLTEGYPPSAKLLVKMELNRVMAPCKKSIDLRG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC RVQGDCREYEIDGIKHWFDDVAFNAYYKNTRKFGGYTEGVWEALINTRNSFRALGKGGQP CCCCCCCEEECCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCHHHHHHCCCCCC ASSQGLSDASSPFEAEAVHLGYDLKRQEKRLRVHSQVDITLSKGQLLHGVSVDLSASGAK CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEECEEEEEEECCCEEECEEEEEECCCCE FKVPSAFNYSLGEVIQITFSELAKTSQIAHVDKPIEYRVLAVEDSYENDAVKFLRCLRLT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCC DTNVVSRVIDESLNSSAKRARHDNQDKIIRARTRGYEHIYLKHTCNLPLFFQGDELKLAM CHHHHHHHHHHHHCHHHHHHCCCCHHHEEEHHCCCCEEEEEEEECCCEEEEECCCEEEEE LTPNNMPIWQYWHDERNQQVFGSLFNSQRMSMLMRPGLKGASNVIYAFTHEHEGKNFFYS ECCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEE MLMPEATREQRQLFWHLGAKRASWRAFRISIFELSENERQQLGSFSQELAEASSGLTHCG HHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHH ILQEIADNSNGADYLFTEKPRLPSSTLNAFRHTRKIIGSPKGIFFDAQSRRKEPRYRFQS HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCHHCCC PLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLHELQLYDKKLPLDKIP CCEEEECCCEEECCCEEEECCCCEEEEECCCHHHHCCCCEEEEEEHEEEECCCCCCCCCC YRVVRVSPDNKQVQLVIDENSQTMKTIAFFNSIIEHNQDKLKPQNEILPSNELLESLHGI EEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHH LLSKMVSTPVFISKMQSGYRTKAIGVNFPLEKHLMVLAKLGHKENFSLEPIYKGRSNTLI HHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCEE ANPTKRIEGAEPHHHDIYIAVAKFGDKIKAVQTKLTNEFDSVKERILFIKKAQMSGEFYV ECCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE LRLSTSPIFSPMTSLLQKDLNELSQLSMHQASKLEKELATLVGYCEIEEVTEEILVRLEL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE TN CC >Mature Secondary Structure MEQAEILSIAERLIPVYHAEDFDFVLGQLTEGYPPSAKLLVKMELNRVMAPCKKSIDLRG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCC RVQGDCREYEIDGIKHWFDDVAFNAYYKNTRKFGGYTEGVWEALINTRNSFRALGKGGQP CCCCCCCEEECCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCHHHHHHCCCCCC ASSQGLSDASSPFEAEAVHLGYDLKRQEKRLRVHSQVDITLSKGQLLHGVSVDLSASGAK CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEECEEEEEEECCCEEECEEEEEECCCCE FKVPSAFNYSLGEVIQITFSELAKTSQIAHVDKPIEYRVLAVEDSYENDAVKFLRCLRLT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCC DTNVVSRVIDESLNSSAKRARHDNQDKIIRARTRGYEHIYLKHTCNLPLFFQGDELKLAM CHHHHHHHHHHHHCHHHHHHCCCCHHHEEEHHCCCCEEEEEEEECCCEEEEECCCEEEEE LTPNNMPIWQYWHDERNQQVFGSLFNSQRMSMLMRPGLKGASNVIYAFTHEHEGKNFFYS ECCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEE MLMPEATREQRQLFWHLGAKRASWRAFRISIFELSENERQQLGSFSQELAEASSGLTHCG HHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHH ILQEIADNSNGADYLFTEKPRLPSSTLNAFRHTRKIIGSPKGIFFDAQSRRKEPRYRFQS HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCHHCCC PLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLHELQLYDKKLPLDKIP CCEEEECCCEEECCCEEEECCCCEEEEECCCHHHHCCCCEEEEEEHEEEECCCCCCCCCC YRVVRVSPDNKQVQLVIDENSQTMKTIAFFNSIIEHNQDKLKPQNEILPSNELLESLHGI EEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCHHHHHHHHHHH LLSKMVSTPVFISKMQSGYRTKAIGVNFPLEKHLMVLAKLGHKENFSLEPIYKGRSNTLI HHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCEE ANPTKRIEGAEPHHHDIYIAVAKFGDKIKAVQTKLTNEFDSVKERILFIKKAQMSGEFYV ECCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE LRLSTSPIFSPMTSLLQKDLNELSQLSMHQASKLEKELATLVGYCEIEEVTEEILVRLEL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE TN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA