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The map label for this gene is yqgE [C]

Identifier: 27364900

GI number: 27364900

Start: 1501453

End: 1502016

Strand: Reverse

Name: yqgE [C]

Synonym: VV1_1529

Alternate gene names: 27364900

Gene position: 1502016-1501453 (Counterclockwise)

Preceding gene: 27364901

Following gene: 27364899

Centisome position: 45.77

GC content: 48.76

Gene sequence:

>564_bases
ATGAACCTGACAAATCATTTTCTGGTTGCGATGCCGGGTATGAAAGATCCCTACTTTCAGCACAGCGTCATCTATATCTG
TGAACATAATGAAGAAGGCGCAATGGGCTTAATGATCAACGCGCCTATTGATATCACCGTGGGCAAAATGCTCGAGCAAG
TCGATGTCCAGCCTGTTCATCCTCAGTTGAACACCTCAAGTCTGACCAAGCCAGTCTACAATGGCGGGCCAGTCGCTGAA
GATCGCGGCTTCATTCTCCATAGACCGAAAGATTTCTATGAGTCGAGCTTACAAATGACCGAGCAGATCTCCGTTACGAC
CTCAAAGGACATTTTGACTGTGCTTGGCACAGAAGCGGAACCAAGCAGCTACATCGTCGCACTCGGTTACTCAGGCTGGA
GTGCTGGACAACTCGAAGCCGAATTAGCGGAAAACTCGTGGCTCACGGTTGAAGCCAATCCTGATATTATTTTTGACACA
CCGATAGCAATGCGCTGGCAAAAAGCCGTGCAAATGCTTGGAATTCACGCGTCTCAGCTTTCCGATCAAGCTGGTCACGC
TTAA

Upstream 100 bases:

>100_bases
TAAACTAATGGACGCGATTGAACGTCGTTTACAAGCTCAAGCTTAAACATGAGTGTTGCAGAGCCAGCGATGGCTCTGCT
GTAACAGATTGGAGTCCTGT

Downstream 100 bases:

>100_bases
CCCGTTTGACTTAGGTTATTTATGTCTCGCACCATCATGGCATTCGATTTTGGCACCAAAAGCATTGGTAGTGCCATCGG
CCAAGAAATTACTGGCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNLTNHFLVAMPGMKDPYFQHSVIYICEHNEEGAMGLMINAPIDITVGKMLEQVDVQPVHPQLNTSSLTKPVYNGGPVAE
DRGFILHRPKDFYESSLQMTEQISVTTSKDILTVLGTEAEPSSYIVALGYSGWSAGQLEAELAENSWLTVEANPDIIFDT
PIAMRWQKAVQMLGIHASQLSDQAGHA

Sequences:

>Translated_187_residues
MNLTNHFLVAMPGMKDPYFQHSVIYICEHNEEGAMGLMINAPIDITVGKMLEQVDVQPVHPQLNTSSLTKPVYNGGPVAE
DRGFILHRPKDFYESSLQMTEQISVTTSKDILTVLGTEAEPSSYIVALGYSGWSAGQLEAELAENSWLTVEANPDIIFDT
PIAMRWQKAVQMLGIHASQLSDQAGHA
>Mature_187_residues
MNLTNHFLVAMPGMKDPYFQHSVIYICEHNEEGAMGLMINAPIDITVGKMLEQVDVQPVHPQLNTSSLTKPVYNGGPVAE
DRGFILHRPKDFYESSLQMTEQISVTTSKDILTVLGTEAEPSSYIVALGYSGWSAGQLEAELAENSWLTVEANPDIIFDT
PIAMRWQKAVQMLGIHASQLSDQAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=188, Percent_Identity=47.3404255319149, Blast_Score=199, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1529_VIBVU (Q8DCB0)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760428.1
- ProteinModelPortal:   Q8DCB0
- SMR:   Q8DCB0
- GeneID:   1178444
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1529
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   PRK00228
- BioCyc:   VVUL216895:VV1_1529-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20588; Mature: 20588

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTNHFLVAMPGMKDPYFQHSVIYICEHNEEGAMGLMINAPIDITVGKMLEQVDVQPVH
CCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHCCCCCCC
PQLNTSSLTKPVYNGGPVAEDRGFILHRPKDFYESSLQMTEQISVTTSKDILTVLGTEAE
CCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
PSSYIVALGYSGWSAGQLEAELAENSWLTVEANPDIIFDTPIAMRWQKAVQMLGIHASQL
CCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHHCCCHHHH
SDQAGHA
CCCCCCC
>Mature Secondary Structure
MNLTNHFLVAMPGMKDPYFQHSVIYICEHNEEGAMGLMINAPIDITVGKMLEQVDVQPVH
CCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHCCCCCCC
PQLNTSSLTKPVYNGGPVAEDRGFILHRPKDFYESSLQMTEQISVTTSKDILTVLGTEAE
CCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
PSSYIVALGYSGWSAGQLEAELAENSWLTVEANPDIIFDTPIAMRWQKAVQMLGIHASQL
CCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHHCCCHHHH
SDQAGHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA