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The map label for this gene is yigM [H]

Identifier: 27364535

GI number: 27364535

Start: 1115004

End: 1115894

Strand: Reverse

Name: yigM [H]

Synonym: VV1_1114

Alternate gene names: 27364535

Gene position: 1115894-1115004 (Counterclockwise)

Preceding gene: 27364536

Following gene: 27364531

Centisome position: 34.0

GC content: 50.28

Gene sequence:

>891_bases
ATGTTTTATCTCTCCGCAGTCACCCTGTTATGGGCATTTTCATTTAGCTTGATTGGCGTTTACCTCGCCGGTCAGGTGGA
TTCTTGGTTTTCGGTGCTGATGCGCGTAGCACTCGCCAGCGTCGTGTTTGTTCCTTTCCTCAAATTCAAAGGGGTCAGCA
AGCGTCTGATCGGTAAATTAATGGTGGTCGGCGGCTTCCAGCTCGGCTTGATGTACTGCTTCTATTACCAATCGTTTCTG
CTGCTGTCTGTTCCTGAAGTGTTGCTGTTCACCGTCTTTACGCCGATCTACGTCACGCTGATCTACGATTTGCTGCACGG
GCGCTTCTCTCCTTGGTATTTGGTGACGGCCATCATCGCCGTATTAGGCGCCGTCTTTATCAAATTTGCCACCATTAACC
CGAACTTCTTGCTGGGCTTTTTGGTGGTGCAAGGAGCAAACCTCTGTTTTGCCATTGGCCAAGTGGGCTACAAATACATC
ATGGAGAAAGAGCAACTCGAGTTGCCACAACACACGGTATTTGGCTACTTCTACCTTGGTGCACTGTGTGTGGCCTTAGT
GGCGTTTGCTTTAATGGGCAATCCGAGCAAGCTGCCCACCACCGAACTGCAATGGGGAATTTTGATTTACTTAGGCCTGA
TTGCATCTGGCTTGGGCTATTTTGCCTGGAACAAAGGGGCAACGTTGGTTAATGCTGGAGCCTTGGCGGTAATGAACAAC
GCTTTGGTGCCAGCGGGGCTTATCGTCAACATCGTGATTTGGAATCGCGATGTCGATTTTCTGCGCCTAACATTGGGCGG
CGGGGTCATTCTGTTTTCGCTGTGGCTGAATGAAACTTGGGTCAAAGCCAAAGTGGAACGCGACTTTGCTCGCAAAGCGT
CACAAGCCTAG

Upstream 100 bases:

>100_bases
CGGTTGATATGTTGGTTGTACCACTTAAAGAGTGATTTTGCTTTTGCCCTTCTCGGCAAATCGGTAGACTGCGGACATTT
GTTATTTACTCGTTATCACT

Downstream 100 bases:

>100_bases
CCCTTATCTCGCCTAGCGCCCTGCTTCAATGACCCACATGCACTCAGCCCACCATTCGGTGGGCTGAGTCGTTATTCTTG
CTTAAGCACGCTTAGTGCAC

Product: putative acetate efflux pump, MadN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MFYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALASVVFVPFLKFKGVSKRLIGKLMVVGGFQLGLMYCFYYQSFL
LLSVPEVLLFTVFTPIYVTLIYDLLHGRFSPWYLVTAIIAVLGAVFIKFATINPNFLLGFLVVQGANLCFAIGQVGYKYI
MEKEQLELPQHTVFGYFYLGALCVALVAFALMGNPSKLPTTELQWGILIYLGLIASGLGYFAWNKGATLVNAGALAVMNN
ALVPAGLIVNIVIWNRDVDFLRLTLGGGVILFSLWLNETWVKAKVERDFARKASQA

Sequences:

>Translated_296_residues
MFYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALASVVFVPFLKFKGVSKRLIGKLMVVGGFQLGLMYCFYYQSFL
LLSVPEVLLFTVFTPIYVTLIYDLLHGRFSPWYLVTAIIAVLGAVFIKFATINPNFLLGFLVVQGANLCFAIGQVGYKYI
MEKEQLELPQHTVFGYFYLGALCVALVAFALMGNPSKLPTTELQWGILIYLGLIASGLGYFAWNKGATLVNAGALAVMNN
ALVPAGLIVNIVIWNRDVDFLRLTLGGGVILFSLWLNETWVKAKVERDFARKASQA
>Mature_296_residues
MFYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALASVVFVPFLKFKGVSKRLIGKLMVVGGFQLGLMYCFYYQSFL
LLSVPEVLLFTVFTPIYVTLIYDLLHGRFSPWYLVTAIIAVLGAVFIKFATINPNFLLGFLVVQGANLCFAIGQVGYKYI
MEKEQLELPQHTVFGYFYLGALCVALVAFALMGNPSKLPTTELQWGILIYLGLIASGLGYFAWNKGATLVNAGALAVMNN
ALVPAGLIVNIVIWNRDVDFLRLTLGGGVILFSLWLNETWVKAKVERDFARKASQA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=289, Percent_Identity=50.1730103806228, Blast_Score=287, Evalue=7e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32829; Mature: 32829

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALASVVFVPFLKFKGVSKRLIGKL
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MVVGGFQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDLLHGRFSPWYLVTAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLGAVFIKFATINPNFLLGFLVVQGANLCFAIGQVGYKYIMEKEQLELPQHTVFGYFYLG
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALCVALVAFALMGNPSKLPTTELQWGILIYLGLIASGLGYFAWNKGATLVNAGALAVMNN
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCHHHHHHC
ALVPAGLIVNIVIWNRDVDFLRLTLGGGVILFSLWLNETWVKAKVERDFARKASQA
CCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFYLSAVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALASVVFVPFLKFKGVSKRLIGKL
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MVVGGFQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDLLHGRFSPWYLVTAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLGAVFIKFATINPNFLLGFLVVQGANLCFAIGQVGYKYIMEKEQLELPQHTVFGYFYLG
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALCVALVAFALMGNPSKLPTTELQWGILIYLGLIASGLGYFAWNKGATLVNAGALAVMNN
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCHHHHHHC
ALVPAGLIVNIVIWNRDVDFLRLTLGGGVILFSLWLNETWVKAKVERDFARKASQA
CCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]