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The map label for this gene is yihD [H]

Identifier: 27364472

GI number: 27364472

Start: 1043463

End: 1043729

Strand: Reverse

Name: yihD [H]

Synonym: VV1_1039

Alternate gene names: 27364472

Gene position: 1043729-1043463 (Counterclockwise)

Preceding gene: 27364473

Following gene: 27364471

Centisome position: 31.8

GC content: 44.19

Gene sequence:

>267_bases
ATGAAGTGTCACCGTATTGAAGAGCTACTTGAGTTGCTTGAGCCAGAATGGCAAAAAGACCAAGAGATGAACTTACTGCA
GTTTATCGTCAAGCTAGCGGGCGAAGCGGGTTATCACGGCAAGCTAGAAGAGCTGACTGACGATGTGCTGATCTACCACC
TAAAAATGCGTAACAGTGCGAAAGATGAAATGATTCCAGGCCTGAAAAAAGACCAAGAAGATGATTTCAAAACAGCGATT
CTACGCGCACGCGGTATCATTAAATAA

Upstream 100 bases:

>100_bases
GCTGCGCTTTTTTCTTTCTCTCCACTCGGTTTGTTATTTTGCTTCGCCAAGCAATTTGATACCTTTACGCCAAAGACCTA
TAAAATTTGTGGAGAAAGAA

Downstream 100 bases:

>100_bases
GTTAACAACTCATTCACTAAGCGACCTTCTGGTCGCTTTTTTATTTTCTGCCACTGTTCAGCGAAAAATTGCGTTAATTG
TCCTGCTTTTTGTTGTTAAA

Product: protein YihD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKCHRIEELLELLEPEWQKDQEMNLLQFIVKLAGEAGYHGKLEELTDDVLIYHLKMRNSAKDEMIPGLKKDQEDDFKTAI
LRARGIIK

Sequences:

>Translated_88_residues
MKCHRIEELLELLEPEWQKDQEMNLLQFIVKLAGEAGYHGKLEELTDDVLIYHLKMRNSAKDEMIPGLKKDQEDDFKTAI
LRARGIIK
>Mature_88_residues
MKCHRIEELLELLEPEWQKDQEMNLLQFIVKLAGEAGYHGKLEELTDDVLIYHLKMRNSAKDEMIPGLKKDQEDDFKTAI
LRARGIIK

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0845 [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=88, Percent_Identity=67.0454545454545, Blast_Score=130, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10323; Mature: 10323

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHRIEELLELLEPEWQKDQEMNLLQFIVKLAGEAGYHGKLEELTDDVLIYHLKMRNSA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
KDEMIPGLKKDQEDDFKTAILRARGIIK
CHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCHRIEELLELLEPEWQKDQEMNLLQFIVKLAGEAGYHGKLEELTDDVLIYHLKMRNSA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
KDEMIPGLKKDQEDDFKTAILRARGIIK
CHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]