| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is ccoG [H]
Identifier: 27364471
GI number: 27364471
Start: 1041766
End: 1043187
Strand: Reverse
Name: ccoG [H]
Synonym: VV1_1038
Alternate gene names: 27364471
Gene position: 1043187-1041766 (Counterclockwise)
Preceding gene: 27364472
Following gene: 27364470
Centisome position: 31.79
GC content: 49.3
Gene sequence:
>1422_bases ATGAGTCAGGATAAAATCGATATCAAAGATGTGACTCCGAAAACCTTTAACCCCAAGACCCACAAAGGCAAGGGGGATCG GTTTAACCCAAATAACCGCATTTACGTACGTGAGAGTAAAGGCACATTCCAAAAACTGCGCCGATATGGTGGCTGGTTTT TGCTGCTGCTATTTACCTTAACTCCATGGATTTCCTACGGCGATCGCCAAGCGATTCTGTTGGATATCGGTAGCCAACAG TTCAACTTCTTCGGCACTACCCTCTACCCACAAGACCTGACCTTGCTGGCCTTGCTGTTTATGATTGCCGCCTTTGGTCT GTTTTTCATCACTACGTTTTTGGGCCGAGTGTGGTGTGGCTACTTATGCCCACAAACCGTTTGGACCTTTATGTACATCT GGTTTGAAGAGAAACTCGAGGGCAGCGCCAACAAACGCCGCAAGCAAGATTCCGGCAAACTGACGCCCAATCTCGCCATG CGAAAAAGCGCAAAGCATGTCGCGTGGTTTGCCATCGCGCTCGCGACAGGCTTCACCTTCGTCGGTTATTTTGTCCCGGT GCGTGAACTGGTGGTGGATTTCTTTACCTTTAACGCCAGCTTCTGGCCTGTTTTCTGGGTGATGTTCTTTGCCATCTGTA CTTACGCCAACGCAGGTTGGATGCGCTCTATCGTTTGTTTGCACATGTGCCCATACGCGCGCTTCCAATCAGCGATGTTT GATAAAGACACCTTTATCGTCGGTTATGACAGTCAGCGCGGCGAACAGCGTGGCCCACGTTCACGCAAAGCCGATCCGAA GCAGCTCGGGTTAGGTGACTGTATTGACTGCGATCTGTGTGTGCAAGTGTGCCCAACGGGGATTGATATTCGTGATGGCC TGCAATACGAGTGTATTAACTGTGGTGCGTGTATCGATGCCTGTAATACCACCATGGATAAAATGGGCTATGAAAAAGGG CTGATCAACTACACCACCGAGCATCGTCTGTCTGGGAAACACACCAAAGTCATGCGACCTAAGTTGATCGGTTATGGCTT GGTATTGCTGGTGATGTTGGGTTTGTTCTTCGCACAAATTGCTGCCGTTGACCCTGCGGGCCTCAGCGTGATTCGCGATC GCAACCAGCTGTTCCGCGTCAACAGTGCCGGTGAAGTGGAAAACACCTACACCCTCAAAATCATCAACAAAACTCAACAA GTGCAAGAATATCACTTGGATGTGAAGGGGCTCAGTGAGGTAACTTGGTATGGTAAGCAAACCATTCAGGTCAACCCAGG CGAAGTTCTCAACTTACCACTCAGTCTTGGCGTGGATCCCGAGAAGCTCTCCTCTCCAATTAGCACGATTCAGTTTATAC TGGACGACAAGAGCAACGACTTCACCATTGAAGTAGAAAGCCGTTTCATCAAGAAACTGTAA
Upstream 100 bases:
>100_bases CAAAGCCTGATTGTGTATAAACACATCGGCATTTGTGAGCAAAGTCAGTGAGCGCAAACCAAGAGAAATTGCGCCATTAA AGCCTAAGAAGGATCAATCC
Downstream 100 bases:
>100_bases CTTCAACCCAATTCATGGACAAAGGCTCAGCAATGAGCCTTTTTATTTACTATGTCGCTAGGCGCATTCAATTTTGACGC ATTAACGCCCGATTTTATGT
Product: cytochrome c oxidase accessory protein CcoG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFTLTPWISYGDRQAILLDIGSQQ FNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNLAM RKSAKHVAWFAIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAGWMRSIVCLHMCPYARFQSAMF DKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACNTTMDKMGYEKG LINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKTQQ VQEYHLDVKGLSEVTWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSNDFTIEVESRFIKKL
Sequences:
>Translated_473_residues MSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFTLTPWISYGDRQAILLDIGSQQ FNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNLAM RKSAKHVAWFAIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAGWMRSIVCLHMCPYARFQSAMF DKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACNTTMDKMGYEKG LINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKTQQ VQEYHLDVKGLSEVTWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSNDFTIEVESRFIKKL >Mature_472_residues SQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFTLTPWISYGDRQAILLDIGSQQF NFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNLAMR KSAKHVAWFAIALATGFTFVGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAGWMRSIVCLHMCPYARFQSAMFD KDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACNTTMDKMGYEKGL INYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQIAAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKTQQV QEYHLDVKGLSEVTWYGKQTIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSNDFTIEVESRFIKKL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53941; Mature: 53810
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFTL CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH TPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCG HHHHCCCCCEEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNLAMRKSAKHVAWFAIALATGFTF HHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH VGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHC DKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECIN CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEC CGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQI CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH AAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKTQQVQEYHLDVKGLSEVTWYGKQ HHCCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHEECCCE TIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSNDFTIEVESRFIKKL EEEECCCCEEECCEECCCCHHHHHCHHHHHHHHEECCCCCEEEEEHHHHHHCC >Mature Secondary Structure SQDKIDIKDVTPKTFNPKTHKGKGDRFNPNNRIYVRESKGTFQKLRRYGGWFLLLLFTL CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH TPWISYGDRQAILLDIGSQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCG HHHHCCCCCEEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGSANKRRKQDSGKLTPNLAMRKSAKHVAWFAIALATGFTF HHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH VGYFVPVRELVVDFFTFNASFWPVFWVMFFAICTYANAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHC DKDTFIVGYDSQRGEQRGPRSRKADPKQLGLGDCIDCDLCVQVCPTGIDIRDGLQYECIN CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEC CGACIDACNTTMDKMGYEKGLINYTTEHRLSGKHTKVMRPKLIGYGLVLLVMLGLFFAQI CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH AAVDPAGLSVIRDRNQLFRVNSAGEVENTYTLKIINKTQQVQEYHLDVKGLSEVTWYGKQ HHCCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHEECCCE TIQVNPGEVLNLPLSLGVDPEKLSSPISTIQFILDDKSNDFTIEVESRFIKKL EEEECCCCEEECCEECCCCHHHHHCHHHHHHHHEECCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]