| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is crcB
Identifier: 27364404
GI number: 27364404
Start: 971284
End: 971664
Strand: Reverse
Name: crcB
Synonym: VV1_0965
Alternate gene names: 27364404
Gene position: 971664-971284 (Counterclockwise)
Preceding gene: 326423786
Following gene: 27364403
Centisome position: 29.61
GC content: 45.14
Gene sequence:
>381_bases ATGAGTCAATTTGCGATATTGGGTTTCATTGCTTTGGGCGGCGCATTTGGCGCTTGTTCTCGTTACTTAGTGTCAGAGCT CTGTGTTGTGCTGTTAGGCAGAGGTTTTCCTTATGGCACGTTAACCGTAAACGTGGTCGGTTCTTTTATTATGGGTCTCT TAATTGCCGCCTTTGAGAGTGAGTTGTTGGCGACAGAGCCATGGCGACAAATAATCGGTTTGGGCTTTTTGGGTGCACTA ACAACGTTCTCGACATTCTCGATGGATAACGTATTGCTGATGCAGCAAGGCGCATTTTTCAAAATGGGCTTAAACGTAGT GTTAAACGTGACCTTGAGTATCACTGCTGCTTGGGTAGGCTTCCAATTACTTAAATCGTGA
Upstream 100 bases:
>100_bases GCAATTCACAGATACATTGTCTAAATGAAATTATTGTTTTTTGTACTCGATCTCTGTGTGGATGTGGCTACAATGTGGCC ATTAGATTTGTGAGGTTGCT
Downstream 100 bases:
>100_bases AGCAATGGGCGAAATTGAGTTAAATTTTAAACAGGTCGGCTTGGTTTAACCAAGCCGATTTCATATAATCGTTTCACTTG TCGGAGTGCCTTAGGGCTGA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSQFAILGFIALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFESELLATEPWRQIIGLGFLGAL TTFSTFSMDNVLLMQQGAFFKMGLNVVLNVTLSITAAWVGFQLLKS
Sequences:
>Translated_126_residues MSQFAILGFIALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFESELLATEPWRQIIGLGFLGAL TTFSTFSMDNVLLMQQGAFFKMGLNVVLNVTLSITAAWVGFQLLKS >Mature_125_residues SQFAILGFIALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFESELLATEPWRQIIGLGFLGALT TFSTFSMDNVLLMQQGAFFKMGLNVVLNVTLSITAAWVGFQLLKS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=100, Percent_Identity=43, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_VIBVU (Q8DDL3)
Other databases:
- EMBL: AE016795 - RefSeq: NP_759932.1 - GeneID: 1177902 - GenomeReviews: AE016795_GR - KEGG: vvu:VV1_0965 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: PRK14200 - BioCyc: VVUL216895:VV1_0965-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13482; Mature: 13351
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc3ced30)-; HASH(0xd1f78c4)-; HASH(0xd72424c)-; HASH(0xd5362d8)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFAILGFIALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFES CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLATEPWRQIIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGLNVVLNVTLSITAAWVG HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH FQLLKS HHHHCH >Mature Secondary Structure SQFAILGFIALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFES CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLATEPWRQIIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGLNVVLNVTLSITAAWVG HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH FQLLKS HHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA