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The map label for this gene is gspH [H]

Identifier: 27364321

GI number: 27364321

Start: 880573

End: 881175

Strand: Reverse

Name: gspH [H]

Synonym: VV1_0873

Alternate gene names: 27364321

Gene position: 881175-880573 (Counterclockwise)

Preceding gene: 27364322

Following gene: 27364320

Centisome position: 26.85

GC content: 50.25

Gene sequence:

>603_bases
TTGAAACCACCTTTTTCATCTCGCTTAGCGGGTTTTACACTGATCGAAATTCTGTTGGTGCTGGTGTTGTTGTCTCTGAC
TGCGGTGGCGGTTATCGCCACCCTTCCCACTCGCAGTGACGAGCGGGGCAAGAAATACGCGCAGAGTTTTTACCAACGAT
TACAGCTCCTCAACGAAGAGGCGGTGCTCAGTGGTAAAGACTTTGGTGTTCGGGTCGAGGAAGAAAAATCACGCTACACC
TTACTCAAATTGGAAGCCGATGGCTGGCAGACGTTGGAGTTGAATAAAATCCCCGCCACCACCGAGCTTGAAGATGAAGT
AGCGATGCAACTGACCTTAGGGGGAGGGGCATGGCAGCAAGACGATCGCCTGTTCAAGCCGGGCTCTCTGTTTGATGAAG
AGATGTTTGCCGAAGAAGAAAAAGAGAAAAAACAGCGACCGCCGCAGATTTTCATTTTATCCAGCGGAGAATTGACGCCG
TTTTCATTGTCTTTTTATCCCAACGATCAGGACGCGACCGAAAATGGTTGGCGAGTACGAGCCAAAGACACAGGGCAGAT
TATTCTGCTGGCTCCCGGTGAAGAAGAGCAAGACGATGGTTAG

Upstream 100 bases:

>100_bases
GCAGATGGTCAAGAAGGCGGTGAAGGCGCAGCGGCAGATATTGGCAACTGGAACATGCAAGACTTCCAATAACAGGACGT
TGAGTCGAAGAGGCAACCAC

Downstream 100 bases:

>100_bases
ACGACGCAAATACGCAGGCATGACCTTGCTTGAGGTGCTGGTGGCGTTGGCGATATTTGCCACTGCGGCGATGAGCGTGA
TCCGTGCCGTTAGCCAGCAC

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Cholera toxin secretion protein epsH [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKPPFSSRLAGFTLIEILLVLVLLSLTAVAVIATLPTRSDERGKKYAQSFYQRLQLLNEEAVLSGKDFGVRVEEEKSRYT
LLKLEADGWQTLELNKIPATTELEDEVAMQLTLGGGAWQQDDRLFKPGSLFDEEMFAEEEKEKKQRPPQIFILSSGELTP
FSLSFYPNDQDATENGWRVRAKDTGQIILLAPGEEEQDDG

Sequences:

>Translated_200_residues
MKPPFSSRLAGFTLIEILLVLVLLSLTAVAVIATLPTRSDERGKKYAQSFYQRLQLLNEEAVLSGKDFGVRVEEEKSRYT
LLKLEADGWQTLELNKIPATTELEDEVAMQLTLGGGAWQQDDRLFKPGSLFDEEMFAEEEKEKKQRPPQIFILSSGELTP
FSLSFYPNDQDATENGWRVRAKDTGQIILLAPGEEEQDDG
>Mature_200_residues
MKPPFSSRLAGFTLIEILLVLVLLSLTAVAVIATLPTRSDERGKKYAQSFYQRLQLLNEEAVLSGKDFGVRVEEEKSRYT
LLKLEADGWQTLELNKIPATTELEDEVAMQLTLGGGAWQQDDRLFKPGSLFDEEMFAEEEKEKKQRPPQIFILSSGELTP
FSLSFYPNDQDATENGWRVRAKDTGQIILLAPGEEEQDDG

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH [H]

EC number: NA

Molecular weight: Translated: 22529; Mature: 22529

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPFSSRLAGFTLIEILLVLVLLSLTAVAVIATLPTRSDERGKKYAQSFYQRLQLLNEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHH
AVLSGKDFGVRVEEEKSRYTLLKLEADGWQTLELNKIPATTELEDEVAMQLTLGGGAWQQ
HEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
DDRLFKPGSLFDEEMFAEEEKEKKQRPPQIFILSSGELTPFSLSFYPNDQDATENGWRVR
CCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE
AKDTGQIILLAPGEEEQDDG
ECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKPPFSSRLAGFTLIEILLVLVLLSLTAVAVIATLPTRSDERGKKYAQSFYQRLQLLNEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHH
AVLSGKDFGVRVEEEKSRYTLLKLEADGWQTLELNKIPATTELEDEVAMQLTLGGGAWQQ
HEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
DDRLFKPGSLFDEEMFAEEEKEKKQRPPQIFILSSGELTPFSLSFYPNDQDATENGWRVR
CCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE
AKDTGQIILLAPGEEEQDDG
ECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]