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The map label for this gene is gspI [H]

Identifier: 27364320

GI number: 27364320

Start: 880218

End: 880580

Strand: Reverse

Name: gspI [H]

Synonym: VV1_0872

Alternate gene names: 27364320

Gene position: 880580-880218 (Counterclockwise)

Preceding gene: 27364321

Following gene: 27364319

Centisome position: 26.83

GC content: 51.79

Gene sequence:

>363_bases
ATGGTTAGACGACGCAAATACGCAGGCATGACCTTGCTTGAGGTGCTGGTGGCGTTGGCGATATTTGCCACTGCGGCGAT
GAGCGTGATCCGTGCCGTTAGCCAGCACATCAACACCGTCGGTTATTTGGAGCAGAAGATGTTTGCTGCCATGGTGGCAG
ACAATCAAATGGCGATGGTGATGCTCAACCCCAAAAATCTAAAAGCCAGCAACGGTGAAGAAGAGTTAGCGGGGCAAACG
TGGTATTGGAAAGTGGCTCCTGTAGCCACGACTCAACCGCTGCTGAAAGCGTTTGATGTGAGTGTGGCAGCAGAAAAGCA
GGCCAGCCCAATGATTACGGTGAGAAGCTATGTGGCGAAATAA

Upstream 100 bases:

>100_bases
TATCCCAACGATCAGGACGCGACCGAAAATGGTTGGCGAGTACGAGCCAAAGACACAGGGCAGATTATTCTGCTGGCTCC
CGGTGAAGAAGAGCAAGACG

Downstream 100 bases:

>100_bases
AACGTGTCGAAAGAGAAACACGCGCCAACGTGGTTTTACCCTCATCGAAGTGTTGGTGTCGATTGCCATTTTTGCCACCT
TAAGTGTGGCCGCGTATCAG

Product: general secretion pathway protein I

Products: NA

Alternate protein names: Cholera toxin secretion protein epsI [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVRRRKYAGMTLLEVLVALAIFATAAMSVIRAVSQHINTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQT
WYWKVAPVATTQPLLKAFDVSVAAEKQASPMITVRSYVAK

Sequences:

>Translated_120_residues
MVRRRKYAGMTLLEVLVALAIFATAAMSVIRAVSQHINTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQT
WYWKVAPVATTQPLLKAFDVSVAAEKQASPMITVRSYVAK
>Mature_120_residues
MVRRRKYAGMTLLEVLVALAIFATAAMSVIRAVSQHINTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQT
WYWKVAPVATTQPLLKAFDVSVAAEKQASPMITVRSYVAK

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010052
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR003413 [H]

Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 13194; Mature: 13194

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRRKYAGMTLLEVLVALAIFATAAMSVIRAVSQHINTVGYLEQKMFAAMVADNQMAMV
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
MLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPMITVRSYVAK
EECCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVRRRKYAGMTLLEVLVALAIFATAAMSVIRAVSQHINTVGYLEQKMFAAMVADNQMAMV
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
MLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPMITVRSYVAK
EECCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]