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The map label for this gene is epsN [H]

Identifier: 27364259

GI number: 27364259

Start: 818275

End: 819417

Strand: Reverse

Name: epsN [H]

Synonym: VV1_0810

Alternate gene names: 27364259

Gene position: 819417-818275 (Counterclockwise)

Preceding gene: 27364260

Following gene: 27364258

Centisome position: 24.97

GC content: 49.69

Gene sequence:

>1143_bases
ATGAACGCACAGTTACTGGTTGAGTTTGTACGCGACCAATACCAAACCCAAGATTTTATTCCGTTGCATGCCCCTACTTT
TGCGGGCAATGAGAAAGCGTATGTGATGGAAACCATTGACAGCACCTTTGTCTCCAGCGTCGGTAAGTTTGTCGATGAGT
TTGAACGTAAAATGGAAGCGTTTACTGGTACTCCAAAGGCGGTGGCGACGGTCAATGGTACCGCAGCCTTGCACGCAGCC
CTCTACATGGCAGGGGTTGAACGTGGTGATTTGGTGATCACACAAGCGCTGACGTTTGTTGCTACTTGTAATGCGCTTTA
TCACATGGGCGCCGAGCCGATTTTTGTGGATGTTTCCCCTGTAAGCTTGGGGCTTTGCCCTAAAGCGATGAGTGCTTTCT
TAGAAGATAATGCACAAGTCACTGAGGCAGGTTGCATCCATAAGCAAACGGGCAGAAGAATCAAAGCCGTGGTGCCAATG
CACACTTTTGGTCATCCGGTAGAATTGGATGAACTGGTTGCTGTTTGTTTGAAATGGAATATTTCGTTAGTCGAGGATGC
TGCGGAAAGCCTAGGCTCGTTTTACAAGGGTAAGCACACGGGGACAATCGGTGATTTTGGTGCGGTGAGTTTCAACGGCA
ACAAAATCATTACCACAGGTGGTGGCGGTATGGTGCTTTGCGGGAGTGAAGAAGCGGGCAGACGCACTAAGCATGTGACT
ACGACGGCGAAAGTGCCGCACCCGTATGAGTTCTTCCATGATGAGCCAGGGTTTAACTACCGCATGCCGAACTTAAATGC
GGCGCTGGGTTGTGCGCAGATGGAAGTACTTGAACACTATCTGGCTCAAAAACGCCAACTGGCACATCAATACCAAGCGT
TTTTCGCCAGCAGCGATGTGACCTTTGTGGTCGAGCCAGAATACGCGCAATCTAACTACTGGCTCAATGCCATCATTTGC
GCGGATGCACAGCAGCGCAATGAACTGCTTGAGCAAACTAATGCCGCTGGCGTAATGACTCGCCCAATTTGGCAGTTAAT
GCATCGTTTGCCAATGTTCGAACAAGCCCTGCGCGGGGATTTGACCCATTCAGAGTTTATTGAAGCACACCTGATTAACT
TACCGAGTACGCCGGTTGCGTAA

Upstream 100 bases:

>100_bases
CAAAGAGCAGATTGTGGCGCTCTTCTTTACGATGATCCCCGATTTCGGTCATAAAGAAACGGGCAAATACCTCGATAGCA
AGATGTAAGGGTGAAGAAGA

Downstream 100 bases:

>100_bases
GGGAACAAGATGACTATAGCTCCTACCACAGATTTATCGGCTGATATTTATTATCAACGTGCTTACTCAGCCTTGTATGA
ACAGGGATGTGATCATTTTG

Product: putative aminotransferase, DegT family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNAQLLVEFVRDQYQTQDFIPLHAPTFAGNEKAYVMETIDSTFVSSVGKFVDEFERKMEAFTGTPKAVATVNGTAALHAA
LYMAGVERGDLVITQALTFVATCNALYHMGAEPIFVDVSPVSLGLCPKAMSAFLEDNAQVTEAGCIHKQTGRRIKAVVPM
HTFGHPVELDELVAVCLKWNISLVEDAAESLGSFYKGKHTGTIGDFGAVSFNGNKIITTGGGGMVLCGSEEAGRRTKHVT
TTAKVPHPYEFFHDEPGFNYRMPNLNAALGCAQMEVLEHYLAQKRQLAHQYQAFFASSDVTFVVEPEYAQSNYWLNAIIC
ADAQQRNELLEQTNAAGVMTRPIWQLMHRLPMFEQALRGDLTHSEFIEAHLINLPSTPVA

Sequences:

>Translated_380_residues
MNAQLLVEFVRDQYQTQDFIPLHAPTFAGNEKAYVMETIDSTFVSSVGKFVDEFERKMEAFTGTPKAVATVNGTAALHAA
LYMAGVERGDLVITQALTFVATCNALYHMGAEPIFVDVSPVSLGLCPKAMSAFLEDNAQVTEAGCIHKQTGRRIKAVVPM
HTFGHPVELDELVAVCLKWNISLVEDAAESLGSFYKGKHTGTIGDFGAVSFNGNKIITTGGGGMVLCGSEEAGRRTKHVT
TTAKVPHPYEFFHDEPGFNYRMPNLNAALGCAQMEVLEHYLAQKRQLAHQYQAFFASSDVTFVVEPEYAQSNYWLNAIIC
ADAQQRNELLEQTNAAGVMTRPIWQLMHRLPMFEQALRGDLTHSEFIEAHLINLPSTPVA
>Mature_380_residues
MNAQLLVEFVRDQYQTQDFIPLHAPTFAGNEKAYVMETIDSTFVSSVGKFVDEFERKMEAFTGTPKAVATVNGTAALHAA
LYMAGVERGDLVITQALTFVATCNALYHMGAEPIFVDVSPVSLGLCPKAMSAFLEDNAQVTEAGCIHKQTGRRIKAVVPM
HTFGHPVELDELVAVCLKWNISLVEDAAESLGSFYKGKHTGTIGDFGAVSFNGNKIITTGGGGMVLCGSEEAGRRTKHVT
TTAKVPHPYEFFHDEPGFNYRMPNLNAALGCAQMEVLEHYLAQKRQLAHQYQAFFASSDVTFVVEPEYAQSNYWLNAIIC
ADAQQRNELLEQTNAAGVMTRPIWQLMHRLPMFEQALRGDLTHSEFIEAHLINLPSTPVA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=339, Percent_Identity=28.3185840707965, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI2367285, Length=346, Percent_Identity=28.3236994219653, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41798; Mature: 41798

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQLLVEFVRDQYQTQDFIPLHAPTFAGNEKAYVMETIDSTFVSSVGKFVDEFERKMEA
CCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
FTGTPKAVATVNGTAALHAALYMAGVERGDLVITQALTFVATCNALYHMGAEPIFVDVSP
HCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
VSLGLCPKAMSAFLEDNAQVTEAGCIHKQTGRRIKAVVPMHTFGHPVELDELVAVCLKWN
CCCCCCHHHHHHHHHCCCCCHHHCCHHHHCCCEEEEEECHHHCCCCCCHHHHHHHHHHCC
ISLVEDAAESLGSFYKGKHTGTIGDFGAVSFNGNKIITTGGGGMVLCGSEEAGRRTKHVT
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCHHHCCCHHEEE
TTAKVPHPYEFFHDEPGFNYRMPNLNAALGCAQMEVLEHYLAQKRQLAHQYQAFFASSDV
EECCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TFVVEPEYAQSNYWLNAIICADAQQRNELLEQTNAAGVMTRPIWQLMHRLPMFEQALRGD
EEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCC
LTHSEFIEAHLINLPSTPVA
CCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAQLLVEFVRDQYQTQDFIPLHAPTFAGNEKAYVMETIDSTFVSSVGKFVDEFERKMEA
CCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
FTGTPKAVATVNGTAALHAALYMAGVERGDLVITQALTFVATCNALYHMGAEPIFVDVSP
HCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
VSLGLCPKAMSAFLEDNAQVTEAGCIHKQTGRRIKAVVPMHTFGHPVELDELVAVCLKWN
CCCCCCHHHHHHHHHCCCCCHHHCCHHHHCCCEEEEEECHHHCCCCCCHHHHHHHHHHCC
ISLVEDAAESLGSFYKGKHTGTIGDFGAVSFNGNKIITTGGGGMVLCGSEEAGRRTKHVT
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCHHHCCCHHEEE
TTAKVPHPYEFFHDEPGFNYRMPNLNAALGCAQMEVLEHYLAQKRQLAHQYQAFFASSDV
EECCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TFVVEPEYAQSNYWLNAIICADAQQRNELLEQTNAAGVMTRPIWQLMHRLPMFEQALRGD
EEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCC
LTHSEFIEAHLINLPSTPVA
CCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]