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The map label for this gene is 27364260

Identifier: 27364260

GI number: 27364260

Start: 819430

End: 820620

Strand: Reverse

Name: 27364260

Synonym: VV1_0811

Alternate gene names: NA

Gene position: 820620-819430 (Counterclockwise)

Preceding gene: 27364262

Following gene: 27364259

Centisome position: 25.0

GC content: 44.08

Gene sequence:

>1191_bases
ATGAACCCAATTCTACCTCTTATCGGTCGTACCGACGCGCTGTTTACTCAAGACATTGCTCAGCATGAAGCTGAGCTATC
TCGTATCGTTTCAGAGTCACGCTTTCTTGTTCTTGGCGGTGCGGGGTCGATTGGCCAAGCGGTCACTAAAGAAATCTTTA
AGCGCCATCCGCAGAAGTTGCACGTTGTTGATATCAGTGAGAACAATATGGTGGAGTTGGTCCGCGATATTCGCAGTTCA
TTCGGTTACATAGATGGCGATTTCCAAACATTCGCGTTGGACATCGGTTCTATTGAGTATGATGCGTTTATTAAGGCGGA
TGGCCAATATGACTATGTATTGAACTTATCTGCACTTAAGCATGTTCGCAGTGAGAAAGACCCATTTACCTTAATGCGAA
TGATCGATGTCAATGTATTCAACACTGATAAGACGATTCAACAGTCGATTGATGCTGGCGTTAAAAAGTACTTCTGTGTC
TCGACGGATAAAGCGGCCAACCCAGTCAATATGATGGGGGCGTCCAAACGCATTATGGAAATGTTCTTGATGCGTAAGAG
TGAGCAAATTGCCATCTCAACTGCGCGTTTTGCTAACGTGGCCTTTTCTGATGGTTCACTGTTGCATGGTTTTAACCAAC
GTATCCAAAAAAATCAGCCGATTGTCGCACCAAATGATATCAAACGTTATTTTGTTACCCCTCAAGAATCGGGTGAGCTG
TGTTTGATGTCGTGTATTTTTGGTGAAAATCGCGACATTTTCTTCCCGAAACTCAGTGAAGCATTGCATCTGATCACTTT
TGCCGACATTGCAGTGAAGTACCTCAAGCAACGTGGTTACGAGCCTCACTTGTGTGCCAATGAAGATGAAGCGCGTGAGC
TCGCCAAAACACTACCAGCACAAGGCAAATGGCCTTGTCTTTTCACCGAAAGTGATACGACGGGTGAAAAGGATTTCGAA
GAGTTTTTCACTGATAAAGAAGTGCTTGATATGGCACGTTTTGAAAATTTGGGCATCATCAAAAATGAACCTCTGTATCA
ACCGGAGCTGTTGAGTCTTTTTGAAGAACAAATTGCCCAAATGAAAGGTCAACGAGCTTGGAGCAAAGAGCAGATTGTGG
CGCTCTTCTTTACGATGATCCCCGATTTCGGTCATAAAGAAACGGGCAAATACCTCGATAGCAAGATGTAA

Upstream 100 bases:

>100_bases
TTGTTTGCTGACATCGCAAACATGGTTGCGTGGTAAGATTTAATCATGTTTAAGTCTATAGTATAATTTAGGCAGTTGAA
ACAATTACATGATAAATACT

Downstream 100 bases:

>100_bases
GGGTGAAGAAGAATGAACGCACAGTTACTGGTTGAGTTTGTACGCGACCAATACCAAACCCAAGATTTTATTCCGTTGCA
TGCCCCTACTTTTGCGGGCA

Product: putative capsular polysaccharide biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNPILPLIGRTDALFTQDIAQHEAELSRIVSESRFLVLGGAGSIGQAVTKEIFKRHPQKLHVVDISENNMVELVRDIRSS
FGYIDGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGVKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKYLKQRGYEPHLCANEDEARELAKTLPAQGKWPCLFTESDTTGEKDFE
EFFTDKEVLDMARFENLGIIKNEPLYQPELLSLFEEQIAQMKGQRAWSKEQIVALFFTMIPDFGHKETGKYLDSKM

Sequences:

>Translated_396_residues
MNPILPLIGRTDALFTQDIAQHEAELSRIVSESRFLVLGGAGSIGQAVTKEIFKRHPQKLHVVDISENNMVELVRDIRSS
FGYIDGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGVKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKYLKQRGYEPHLCANEDEARELAKTLPAQGKWPCLFTESDTTGEKDFE
EFFTDKEVLDMARFENLGIIKNEPLYQPELLSLFEEQIAQMKGQRAWSKEQIVALFFTMIPDFGHKETGKYLDSKM
>Mature_396_residues
MNPILPLIGRTDALFTQDIAQHEAELSRIVSESRFLVLGGAGSIGQAVTKEIFKRHPQKLHVVDISENNMVELVRDIRSS
FGYIDGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGVKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKYLKQRGYEPHLCANEDEARELAKTLPAQGKWPCLFTESDTTGEKDFE
EFFTDKEVLDMARFENLGIIKNEPLYQPELLSLFEEQIAQMKGQRAWSKEQIVALFFTMIPDFGHKETGKYLDSKM

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 45027; Mature: 45027

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPILPLIGRTDALFTQDIAQHEAELSRIVSESRFLVLGGAGSIGQAVTKEIFKRHPQKL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEE
HVVDISENNMVELVRDIRSSFGYIDGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALK
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHH
HVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGVKKYFCVSTDKAANPVNMMGASKRIME
HHHCCCCHHHHHHHHCCEEECCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHH
MFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
HHHHCCCCCEEEEHHHHHEEEECCCCHHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCE
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKYLKQRGYEPHLCANEDEARELAKTLPA
EEEEEHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
QGKWPCLFTESDTTGEKDFEEFFTDKEVLDMARFENLGIIKNEPLYQPELLSLFEEQIAQ
CCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
MKGQRAWSKEQIVALFFTMIPDFGHKETGKYLDSKM
HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MNPILPLIGRTDALFTQDIAQHEAELSRIVSESRFLVLGGAGSIGQAVTKEIFKRHPQKL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEE
HVVDISENNMVELVRDIRSSFGYIDGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALK
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHH
HVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGVKKYFCVSTDKAANPVNMMGASKRIME
HHHCCCCHHHHHHHHCCEEECCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHH
MFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
HHHHCCCCCEEEEHHHHHEEEECCCCHHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCE
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKYLKQRGYEPHLCANEDEARELAKTLPA
EEEEEHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
QGKWPCLFTESDTTGEKDFEEFFTDKEVLDMARFENLGIIKNEPLYQPELLSLFEEQIAQ
CCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
MKGQRAWSKEQIVALFFTMIPDFGHKETGKYLDSKM
HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]