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The map label for this gene is yfgL [H]

Identifier: 27363892

GI number: 27363892

Start: 420868

End: 422028

Strand: Reverse

Name: yfgL [H]

Synonym: VV1_0424

Alternate gene names: 27363892

Gene position: 422028-420868 (Counterclockwise)

Preceding gene: 27363893

Following gene: 27363891

Centisome position: 12.86

GC content: 48.66

Gene sequence:

>1161_bases
ATGAAGAAAATGGTCAGGAAAGCCTTATTAGGCATGATTACAGTGGGTGTGTTGGCGGGTTGTGCCAGTGAAGAAGACAC
CATTGTAATGGCGCCATTGCCACAGGTTAATAGCCAGTTCACTCCGCAATCAGCTTGGAGTACCAGTGTGGGGAACGGTG
TAGGCCATTATTTCTCTAAACTCTCTCCTGAATATGCTTACGACAAGCTATTTATCGCCAGTCGTGATGGTGTGGTGAGA
GCTCTGGAACCGACATCAGGTAAGCAACTGTGGAGCCAAAACGTCAAGCAAGGCGATACAGCGAGATTGTCTGGTGGCTT
AACTGCGGCTTACGGCCATGTCTACATTGGCAGTGAAAATGGTGATCTGATCGCTTTGGACGAAGCGACTGGTGAAGTCT
CTTGGCGCATCTCTGTAGTCGGCGAGATCTTAGCAAAGCCCGTTGCTGAAAATGGTCTAGTGATTGTGAATACCAGCAAT
GGCGTATTGATGGCCTTCGACCAAGACAATGGTGAACAAAAGTGGACCATCAGCACTGAAGTACCTAACTTGACTCTGCG
CGGCGATAGTACGCCGACGGCGGTATCAGGTGGTGTGTTTTGGGGAACGGCGAATGGCCGTTTAGCGGCTGCTATTGTTG
AGCGTGGTCAGTTGATCTGGCAACAGCCTGTTGGTACACCAAAAGGTGCGACTGAAATCGATCGTTTAGTGGATGTGGAT
TCATCGCCAATCGTGCTTGGCGGCATGCTTTACGTTGTTGGTTACAATGGCCAACTTATCGCACTCGATTTACGTTCAGG
CAATGCCGTTTGGAAGCGTAATTATTCGTCAGCCATTGATATGGCGACCGATGGCAGTCGACTTTTTGTTGTCACTGATA
AAGATCATGTGGTTGCTGTCGATGCACGTAGCGGAACCGAGCTGTGGCAAAATGAACAGCTAGAGTATCGTTTGTTGACC
GCCCCTGTCATGGTGAATAACTACTTAGTTGTTGGAGACAGCCAAGGCTATTTGCATTGGTTAGATCGTACTACTGGTGA
GTTCGTGGCTCAGCAGATGATCAATGACAGTGGTTTCGCCGTTGGCCCAACAGTATTGCCAGATGGCTATGTCATTACAA
CGCGCAATGGCGATGTAAAGAAACTGACGATCAACGAATAA

Upstream 100 bases:

>100_bases
AGCCGCTTATGCTGCTTACTCTGAAGCGCAACAAGCCGCTGATGCAGGTCAAACTCTGCAAATGAAATTGGATGATCTGG
CAAAATAAGGACTTCATGGC

Downstream 100 bases:

>100_bases
TATCGTGATATAATTCACATTCGGCTCCTGGCTGGTGACAGTTAGGAGCCGTTTTGTTGCTAATTTTTAATAACACGCTG
CAACGTTCAACATTGCAGTC

Product: outer membrane biogenesis protein BamB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKMVRKALLGMITVGVLAGCASEEDTIVMAPLPQVNSQFTPQSAWSTSVGNGVGHYFSKLSPEYAYDKLFIASRDGVVR
ALEPTSGKQLWSQNVKQGDTARLSGGLTAAYGHVYIGSENGDLIALDEATGEVSWRISVVGEILAKPVAENGLVIVNTSN
GVLMAFDQDNGEQKWTISTEVPNLTLRGDSTPTAVSGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
SSPIVLGGMLYVVGYNGQLIALDLRSGNAVWKRNYSSAIDMATDGSRLFVVTDKDHVVAVDARSGTELWQNEQLEYRLLT
APVMVNNYLVVGDSQGYLHWLDRTTGEFVAQQMINDSGFAVGPTVLPDGYVITTRNGDVKKLTINE

Sequences:

>Translated_386_residues
MKKMVRKALLGMITVGVLAGCASEEDTIVMAPLPQVNSQFTPQSAWSTSVGNGVGHYFSKLSPEYAYDKLFIASRDGVVR
ALEPTSGKQLWSQNVKQGDTARLSGGLTAAYGHVYIGSENGDLIALDEATGEVSWRISVVGEILAKPVAENGLVIVNTSN
GVLMAFDQDNGEQKWTISTEVPNLTLRGDSTPTAVSGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
SSPIVLGGMLYVVGYNGQLIALDLRSGNAVWKRNYSSAIDMATDGSRLFVVTDKDHVVAVDARSGTELWQNEQLEYRLLT
APVMVNNYLVVGDSQGYLHWLDRTTGEFVAQQMINDSGFAVGPTVLPDGYVITTRNGDVKKLTINE
>Mature_386_residues
MKKMVRKALLGMITVGVLAGCASEEDTIVMAPLPQVNSQFTPQSAWSTSVGNGVGHYFSKLSPEYAYDKLFIASRDGVVR
ALEPTSGKQLWSQNVKQGDTARLSGGLTAAYGHVYIGSENGDLIALDEATGEVSWRISVVGEILAKPVAENGLVIVNTSN
GVLMAFDQDNGEQKWTISTEVPNLTLRGDSTPTAVSGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
SSPIVLGGMLYVVGYNGQLIALDLRSGNAVWKRNYSSAIDMATDGSRLFVVTDKDHVVAVDARSGTELWQNEQLEYRLLT
APVMVNNYLVVGDSQGYLHWLDRTTGEFVAQQMINDSGFAVGPTVLPDGYVITTRNGDVKKLTINE

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=379, Percent_Identity=45.3825857519789, Blast_Score=353, Evalue=1e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 41516; Mature: 41516

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMVRKALLGMITVGVLAGCASEEDTIVMAPLPQVNSQFTPQSAWSTSVGNGVGHYFSK
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LSPEYAYDKLFIASRDGVVRALEPTSGKQLWSQNVKQGDTARLSGGLTAAYGHVYIGSEN
CCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEEEEEEEECCC
GDLIALDEATGEVSWRISVVGEILAKPVAENGLVIVNTSNGVLMAFDQDNGEQKWTISTE
CCEEEEECCCCCEEEEEEEHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEC
VPNLTLRGDSTPTAVSGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
CCEEEEECCCCCCEEECCEEEECCCCCEEEEEHHCCCEEEECCCCCCCCCHHHHHHHCCC
SSPIVLGGMLYVVGYNGQLIALDLRSGNAVWKRNYSSAIDMATDGSRLFVVTDKDHVVAV
CCCEEEEEEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEE
DARSGTELWQNEQLEYRLLTAPVMVNNYLVVGDSQGYLHWLDRTTGEFVAQQMINDSGFA
ECCCCCHHHCCCCEEEEEEECCEEECCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCE
VGPTVLPDGYVITTRNGDVKKLTINE
ECCEECCCCEEEEECCCCEEEEEECC
>Mature Secondary Structure
MKKMVRKALLGMITVGVLAGCASEEDTIVMAPLPQVNSQFTPQSAWSTSVGNGVGHYFSK
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LSPEYAYDKLFIASRDGVVRALEPTSGKQLWSQNVKQGDTARLSGGLTAAYGHVYIGSEN
CCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEEEEEEEECCC
GDLIALDEATGEVSWRISVVGEILAKPVAENGLVIVNTSNGVLMAFDQDNGEQKWTISTE
CCEEEEECCCCCEEEEEEEHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEC
VPNLTLRGDSTPTAVSGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
CCEEEEECCCCCCEEECCEEEECCCCCEEEEEHHCCCEEEECCCCCCCCCHHHHHHHCCC
SSPIVLGGMLYVVGYNGQLIALDLRSGNAVWKRNYSSAIDMATDGSRLFVVTDKDHVVAV
CCCEEEEEEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEE
DARSGTELWQNEQLEYRLLTAPVMVNNYLVVGDSQGYLHWLDRTTGEFVAQQMINDSGFA
ECCCCCHHHCCCCEEEEEEECCEEECCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCE
VGPTVLPDGYVITTRNGDVKKLTINE
ECCEECCCCEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]