Click here to switch to the map view.

The map label for this gene is 27363876

Identifier: 27363876

GI number: 27363876

Start: 398866

End: 399495

Strand: Reverse

Name: 27363876

Synonym: VV1_0408

Alternate gene names: NA

Gene position: 399495-398866 (Counterclockwise)

Preceding gene: 27363880

Following gene: 27363875

Centisome position: 12.17

GC content: 47.3

Gene sequence:

>630_bases
ATGCATTTCAAATATGACATTTGGCTTCATGGAGGGGAAATGTTGGCCGCCTATATCCAAGAAATATTGAGCTTACATCT
GAGCTCGCCGCTGTGGCTGTTTATTGGCATCGTGCTGGTTTCCTATCTCTTGGAAGATCTTGCCATCGTGCTAGCCGCAG
GGTTAGCCGTGGAAGGTTACCTCCCTTCTTTGGTTGCCATCGTTGCCATTTTTGTTGGTATTACTACTGGTGATTTAGCG
CTCTATTGGTTGGGCAAATATGGTCAAAGTGTCCGTTTTTTGCGTTATCACACGCTCAAGCATAAAGCGTTTCGCCAGGT
GAGAGGGCGTATTCAAAGTAAGGCTTTCGTGAGTTTGTTTGTGATTCGTTTTATTCCTGGATTGCGCACCTTAGGTTACA
CCCTAAGTGGTTATTGCCTCGTGCCGATGCGTGTTTTTTTGTTGGCGGTCATACTCGCCAGCGCGCTCTGGGTCGGGGGT
GTGTTTGGGTCGGTGTACTGGTTAGGTAGCCAAGCTTTCTTAGCACAAAGCTCGTGGCTTTGGTGGTGGGTGTTAGGCGC
ATTTTTACTGCTGACCGTTATGAATCGTGTCGTGAGCCAGTCTTGGTCAAAAGGAAAAATATCAATATGA

Upstream 100 bases:

>100_bases
CAGCAGAGCAAAACTGCGGACCTAGCTCTGCCAGATCATTCGCCTATTTTTCTTCAATGCGTAATTTTTTTCATCCCCTT
CCGGTCTATTCAAGCAGCTT

Downstream 100 bases:

>100_bases
ATCGAGCCATTGAAATGATTGAACAAGGCCGAGTGAATGCGGGCATGCCGTTGTTAAGTCAATCACCCAAGCGTGAGATT
TCACCTTATGAGTTTCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA
LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGG
VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI

Sequences:

>Translated_209_residues
MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA
LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGG
VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI
>Mature_209_residues
MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA
LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGG
VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23475; Mature: 23475

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGY
CCEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSLVAIVAIFVGITTGDLALYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLF
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGGVFGSVYWLGSQAFLAQSSWL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH
WWWVLGAFLLLTVMNRVVSQSWSKGKISI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGY
CCEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSLVAIVAIFVGITTGDLALYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLF
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGGVFGSVYWLGSQAFLAQSSWL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH
WWWVLGAFLLLTVMNRVVSQSWSKGKISI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA