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The map label for this gene is 27363875

Identifier: 27363875

GI number: 27363875

Start: 397742

End: 398869

Strand: Reverse

Name: 27363875

Synonym: VV1_0407

Alternate gene names: NA

Gene position: 398869-397742 (Counterclockwise)

Preceding gene: 27363876

Following gene: 27363874

Centisome position: 12.15

GC content: 49.82

Gene sequence:

>1128_bases
ATGAATCGAGCCATTGAAATGATTGAACAAGGCCGAGTGAATGCGGGCATGCCGTTGTTAAGTCAATCACCCAAGCGTGA
GATTTCACCTTATGAGTTTCTACCGAGCTGGTTTTTTTATACCCCGGTGGTGGCACAGAGTGTCGTGCAAGGTTTGTGGC
ATCGAGACATCACGCTGCCATTAATTGCGAATCCCGCCATACATCTCAGTGGCATGGTGGGGGAGTCTAAGCACGATATT
TTGACCTTAGCGGGCAAAGAGGCGCAGCGCTGGATTTCACCTTTCATCACCGTCAGCAAACATGGGCAGGAGATTGAGAG
TCTGTTGGCCGAGATCGAGCAATCGTTGCTTGATGCCGGATTGACTTATCCCTTAGTGGCAAAACCCGATCTTGGTTGCC
GTGGCGCGGGCGTGAAGCTTATCGAAACCGAGCAGCAACTTCGCCAATATTTGGACACTTTTCCGCAGCAAGCGCGGTTT
CTGTTGCAGCAAAAAGCGCCTTTTTCGGCGGAGGCAGGGGTGTTTTACGTTCGTCATCCACAAGAAAAGCAGGGGCGGAT
TATTTCAATCACGTTGAAGTACGCGCCATCGGTGGTGGGTGATGGCCAGCGAACACTGAAAACATTAATTGAAGACTCGC
CTCGAGCAGGTAAGTTGACGCATTTGTATTTCCCAAGGCACAGCAACAAGTTGGATTGGGTGCCTGACGCTGGTGAAGAA
GTGCAGCTAGCGTTTGCGGGAAGCCACAGTCGCGGTTCGATATTTCGCAATGGCAACCAATACATCACCCCAGAGTTGAC
TCAGCGTTTAGATGCCATTTTTGATGATTTCAACGGCTTTCATTATGGACGGTTGGATATCAAGTTCGCCGACATTGAAC
AGTTTATGGCTGGAGAAAACTTCACCATTTTGGAAGTGAATGGTGCCAGCAGTGAGGCTGCCCATATCTGGGATAGCGAA
ACGCCTTTGCTGGAGATTTTTTCTACGCTGCTTTTGCAATACCGACTGCTTTTCCAAATTGGTGCGCAACAGAAAAAACT
GGGCCACCGCACGCCGAAAATCCGTGAATTGCTTCGCGCTTGGCAAACTGAGCGTCAATTAGTTCGTCAGTATCCCGCTA
CCGATTAG

Upstream 100 bases:

>100_bases
AAAGCTCGTGGCTTTGGTGGTGGGTGTTAGGCGCATTTTTACTGCTGACCGTTATGAATCGTGTCGTGAGCCAGTCTTGG
TCAAAAGGAAAAATATCAAT

Downstream 100 bases:

>100_bases
CCCCCATTGTTAGGAATTTCCTTATGTTAATGATTGCCAAATCAGACAACCAACAAGCCAGAATGGTGATGAGTTATCCC
GCGGTTGTGCAGGGGTGTTT

Product: D-alanine-D-alanine ligase

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; Alpha/Beta Hydrolase Fold Protein; Ribosomal S6 RimK; Transcriptional Activator HlyU

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNRAIEMIEQGRVNAGMPLLSQSPKREISPYEFLPSWFFYTPVVAQSVVQGLWHRDITLPLIANPAIHLSGMVGESKHDI
LTLAGKEAQRWISPFITVSKHGQEIESLLAEIEQSLLDAGLTYPLVAKPDLGCRGAGVKLIETEQQLRQYLDTFPQQARF
LLQQKAPFSAEAGVFYVRHPQEKQGRIISITLKYAPSVVGDGQRTLKTLIEDSPRAGKLTHLYFPRHSNKLDWVPDAGEE
VQLAFAGSHSRGSIFRNGNQYITPELTQRLDAIFDDFNGFHYGRLDIKFADIEQFMAGENFTILEVNGASSEAAHIWDSE
TPLLEIFSTLLLQYRLLFQIGAQQKKLGHRTPKIRELLRAWQTERQLVRQYPATD

Sequences:

>Translated_375_residues
MNRAIEMIEQGRVNAGMPLLSQSPKREISPYEFLPSWFFYTPVVAQSVVQGLWHRDITLPLIANPAIHLSGMVGESKHDI
LTLAGKEAQRWISPFITVSKHGQEIESLLAEIEQSLLDAGLTYPLVAKPDLGCRGAGVKLIETEQQLRQYLDTFPQQARF
LLQQKAPFSAEAGVFYVRHPQEKQGRIISITLKYAPSVVGDGQRTLKTLIEDSPRAGKLTHLYFPRHSNKLDWVPDAGEE
VQLAFAGSHSRGSIFRNGNQYITPELTQRLDAIFDDFNGFHYGRLDIKFADIEQFMAGENFTILEVNGASSEAAHIWDSE
TPLLEIFSTLLLQYRLLFQIGAQQKKLGHRTPKIRELLRAWQTERQLVRQYPATD
>Mature_375_residues
MNRAIEMIEQGRVNAGMPLLSQSPKREISPYEFLPSWFFYTPVVAQSVVQGLWHRDITLPLIANPAIHLSGMVGESKHDI
LTLAGKEAQRWISPFITVSKHGQEIESLLAEIEQSLLDAGLTYPLVAKPDLGCRGAGVKLIETEQQLRQYLDTFPQQARF
LLQQKAPFSAEAGVFYVRHPQEKQGRIISITLKYAPSVVGDGQRTLKTLIEDSPRAGKLTHLYFPRHSNKLDWVPDAGEE
VQLAFAGSHSRGSIFRNGNQYITPELTQRLDAIFDDFNGFHYGRLDIKFADIEQFMAGENFTILEVNGASSEAAHIWDSE
TPLLEIFSTLLLQYRLLFQIGAQQKKLGHRTPKIRELLRAWQTERQLVRQYPATD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42452; Mature: 42452

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAIEMIEQGRVNAGMPLLSQSPKREISPYEFLPSWFFYTPVVAQSVVQGLWHRDITLP
CCHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LIANPAIHLSGMVGESKHDILTLAGKEAQRWISPFITVSKHGQEIESLLAEIEQSLLDAG
EECCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
LTYPLVAKPDLGCRGAGVKLIETEQQLRQYLDTFPQQARFLLQQKAPFSAEAGVFYVRHP
CCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
QEKQGRIISITLKYAPSVVGDGQRTLKTLIEDSPRAGKLTHLYFPRHSNKLDWVPDAGEE
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCE
VQLAFAGSHSRGSIFRNGNQYITPELTQRLDAIFDDFNGFHYGRLDIKFADIEQFMAGEN
EEEEEECCCCCCCEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCC
FTILEVNGASSEAAHIWDSETPLLEIFSTLLLQYRLLFQIGAQQKKLGHRTPKIRELLRA
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
WQTERQLVRQYPATD
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRAIEMIEQGRVNAGMPLLSQSPKREISPYEFLPSWFFYTPVVAQSVVQGLWHRDITLP
CCHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LIANPAIHLSGMVGESKHDILTLAGKEAQRWISPFITVSKHGQEIESLLAEIEQSLLDAG
EECCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
LTYPLVAKPDLGCRGAGVKLIETEQQLRQYLDTFPQQARFLLQQKAPFSAEAGVFYVRHP
CCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
QEKQGRIISITLKYAPSVVGDGQRTLKTLIEDSPRAGKLTHLYFPRHSNKLDWVPDAGEE
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCE
VQLAFAGSHSRGSIFRNGNQYITPELTQRLDAIFDDFNGFHYGRLDIKFADIEQFMAGEN
EEEEEECCCCCCCEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHCCCC
FTILEVNGASSEAAHIWDSETPLLEIFSTLLLQYRLLFQIGAQQKKLGHRTPKIRELLRA
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
WQTERQLVRQYPATD
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA