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The map label for this gene is treC [H]

Identifier: 27363766

GI number: 27363766

Start: 278287

End: 279972

Strand: Reverse

Name: treC [H]

Synonym: VV1_0288

Alternate gene names: 27363766

Gene position: 279972-278287 (Counterclockwise)

Preceding gene: 326423682

Following gene: 27363764

Centisome position: 8.53

GC content: 46.56

Gene sequence:

>1686_bases
ATGACAACACGTAACACAGATGCACATTGGTGGAAAACCGCCACTATCTATCAAATCTACCCAAAAAGTTTTTGCGACAG
CGGGGCAAAGGGGACGGGAGATATTCAAGGCATCATCTCTAAGTTGGAATATTTGAAGCATCTCGGTATTGATGCAATCT
GGCTAACGCCGGTTTACCAATCGCCGATGGTCGATAATGGATACGACATTTCGGATTACTACCGAATTAATCCTCAGTTT
GGCACGATGGCTGATTTTGATGAATTGCTCGAGAAAGCGCATCAGCTTGGAATCCGTCTTATCATGGACATTGTGGTGAA
CCACACCTCGACCGAACACGCTTGGTTTCAATCGGCACTGGGTAACAAAAACAGTCCGTATCGGGATTACTACATCTGGA
AAGACCCAGTGGAAGGAAAAGTGCCCAATAATTGGCAGTCTAAGTTTGGCGGCAGCGCTTGGGCGCTGGATGAACAAACG
GGCCAATATTATCTGCACCTTTTCGCCAAAGAGCAGGCCGATCTCAATTGGGAAAATCCCACGGTTCGTGAGGAAGTGAA
AAATGTTATTCGTTTTTGGGCGGAAAAAGGCGTCGACGGATTTCGTCTGGACGTCATCAATCTGATTTCGAAGCAACAAG
ATTTTTGCGACGATGAGATTGGCGATGGGCGTCGTTTCTATACTGATGGACCGCGTGTGCACGACTATCTCCAAGAGATC
AGTCAAGCCGTTTTCCAAAAGTATGGCAGTGTGACAGTGGGTGAGATGTCATCGACAACCTTAGAGCATTGTCAGCAGTA
CTCCTCACTTGATGGCAAAGAGCTTTCCATGGTGTTCAATTTCCATCACCTGAAAGTGGATTATTCAAATGGTGAAAAAT
GGACCAAGGCACCATTTGACTTTCTCCAGCTCAAACAGATTTTTAATCATTGGCAAACCGGCCTGAATGGGAAAGGGTGG
GGAGCGCTCTTTTGGTGTAACCATGATCAGCCACGTATCGTGAGCCGTTTGGGCAACGATCAAGTGTATCGCGTTGAATC
GGCAAAAATGTTGGCTGCCTCGGTTCATATGATGCAAGGCACGCCTTATGTTTATCAAGGCGAAGAAATTGGCATGACCA
ACCCAGGGTATACAGCGATTGAACAGTATCGTGATGTTGAAAGCACCAACATGTATCAGATCATGGTTGAGCAGCAAGGA
ATTGACCATGACGAAATGATGGCAATTTTGGCACAAAAGTCTCGTGATAATTCACGCACCCCAATGCAGTGGTCAGAAGA
AAAACACGCAGGATTTACGCAAGGAGAACCTTGGTTAGCGGTGGCGAGTAACTACCCGAAGATCAACGCGGAAGCGGCGG
TGGCGGATCTCAATTCGGTGTTCTATTTCTATAAGCGATTGATTGAACTGCGTAAAGAAGAGCCAGTGATCACCCAAGGT
GATTATCAAGACTTATTACCCGAGCATCAGAGTGTGTTTGCTTATGCACGGACCAGTGCGGCTCAGCAACTGGTGTGCAT
CAATAACTACTACGGGGAAGAAGTAGAGTGCGTGTTGCCATTGGATCTCGACATGCGTAAAGCGAAATGTTTGCTGTCTA
ACTACCAAAATCAACCGAGTGCCATGGCTTCGCATCACCAAGTGCTCAAACCTTACGAGACTCGTATTCTCTTGATTGAA
CGTTAA

Upstream 100 bases:

>100_bases
AGCCAAAGGCGAACTCGAACCGGTAAACGCATAATTTCATCGATTTGGAGTGGCGAATGGCCACTCCGCTTTGTTTCTCT
TCGGTAAGTGAGTCTTTACC

Downstream 100 bases:

>100_bases
GTTTGTTGTTGGTTATAAAGAACGCTAACGGCACACCCCTAATACGTTCAAAGGCTTTGGAAGTTCCAAAGCCTTTTTTT
GTTGCAGGGTAAAACAAATT

Product: alpha,alpha-phosphotrehalase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MTTRNTDAHWWKTATIYQIYPKSFCDSGAKGTGDIQGIISKLEYLKHLGIDAIWLTPVYQSPMVDNGYDISDYYRINPQF
GTMADFDELLEKAHQLGIRLIMDIVVNHTSTEHAWFQSALGNKNSPYRDYYIWKDPVEGKVPNNWQSKFGGSAWALDEQT
GQYYLHLFAKEQADLNWENPTVREEVKNVIRFWAEKGVDGFRLDVINLISKQQDFCDDEIGDGRRFYTDGPRVHDYLQEI
SQAVFQKYGSVTVGEMSSTTLEHCQQYSSLDGKELSMVFNFHHLKVDYSNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW
GALFWCNHDQPRIVSRLGNDQVYRVESAKMLAASVHMMQGTPYVYQGEEIGMTNPGYTAIEQYRDVESTNMYQIMVEQQG
IDHDEMMAILAQKSRDNSRTPMQWSEEKHAGFTQGEPWLAVASNYPKINAEAAVADLNSVFYFYKRLIELRKEEPVITQG
DYQDLLPEHQSVFAYARTSAAQQLVCINNYYGEEVECVLPLDLDMRKAKCLLSNYQNQPSAMASHHQVLKPYETRILLIE
R

Sequences:

>Translated_561_residues
MTTRNTDAHWWKTATIYQIYPKSFCDSGAKGTGDIQGIISKLEYLKHLGIDAIWLTPVYQSPMVDNGYDISDYYRINPQF
GTMADFDELLEKAHQLGIRLIMDIVVNHTSTEHAWFQSALGNKNSPYRDYYIWKDPVEGKVPNNWQSKFGGSAWALDEQT
GQYYLHLFAKEQADLNWENPTVREEVKNVIRFWAEKGVDGFRLDVINLISKQQDFCDDEIGDGRRFYTDGPRVHDYLQEI
SQAVFQKYGSVTVGEMSSTTLEHCQQYSSLDGKELSMVFNFHHLKVDYSNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW
GALFWCNHDQPRIVSRLGNDQVYRVESAKMLAASVHMMQGTPYVYQGEEIGMTNPGYTAIEQYRDVESTNMYQIMVEQQG
IDHDEMMAILAQKSRDNSRTPMQWSEEKHAGFTQGEPWLAVASNYPKINAEAAVADLNSVFYFYKRLIELRKEEPVITQG
DYQDLLPEHQSVFAYARTSAAQQLVCINNYYGEEVECVLPLDLDMRKAKCLLSNYQNQPSAMASHHQVLKPYETRILLIE
R
>Mature_560_residues
TTRNTDAHWWKTATIYQIYPKSFCDSGAKGTGDIQGIISKLEYLKHLGIDAIWLTPVYQSPMVDNGYDISDYYRINPQFG
TMADFDELLEKAHQLGIRLIMDIVVNHTSTEHAWFQSALGNKNSPYRDYYIWKDPVEGKVPNNWQSKFGGSAWALDEQTG
QYYLHLFAKEQADLNWENPTVREEVKNVIRFWAEKGVDGFRLDVINLISKQQDFCDDEIGDGRRFYTDGPRVHDYLQEIS
QAVFQKYGSVTVGEMSSTTLEHCQQYSSLDGKELSMVFNFHHLKVDYSNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGWG
ALFWCNHDQPRIVSRLGNDQVYRVESAKMLAASVHMMQGTPYVYQGEEIGMTNPGYTAIEQYRDVESTNMYQIMVEQQGI
DHDEMMAILAQKSRDNSRTPMQWSEEKHAGFTQGEPWLAVASNYPKINAEAAVADLNSVFYFYKRLIELRKEEPVITQGD
YQDLLPEHQSVFAYARTSAAQQLVCINNYYGEEVECVLPLDLDMRKAKCLLSNYQNQPSAMASHHQVLKPYETRILLIER

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=497, Percent_Identity=30.9859154929577, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI61744477, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI65506891, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI61744479, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI61744475, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI61744481, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI61744483, Length=121, Percent_Identity=30.5785123966942, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI1790687, Length=551, Percent_Identity=58.2577132486388, Blast_Score=664, Evalue=0.0,
Organism=Escherichia coli, GI1786604, Length=192, Percent_Identity=32.2916666666667, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789995, Length=92, Percent_Identity=31.5217391304348, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI25147709, Length=491, Percent_Identity=25.2545824847251, Blast_Score=115, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI32565753, Length=203, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6321726, Length=588, Percent_Identity=38.4353741496599, Blast_Score=390, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6322241, Length=584, Percent_Identity=38.8698630136986, Blast_Score=385, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6322021, Length=584, Percent_Identity=38.8698630136986, Blast_Score=385, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6324416, Length=584, Percent_Identity=38.8698630136986, Blast_Score=384, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6321731, Length=584, Percent_Identity=39.2123287671233, Blast_Score=383, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6319776, Length=584, Percent_Identity=39.041095890411, Blast_Score=382, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6322245, Length=585, Percent_Identity=37.0940170940171, Blast_Score=377, Evalue=1e-105,
Organism=Drosophila melanogaster, GI221330053, Length=510, Percent_Identity=36.4705882352941, Blast_Score=292, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24586597, Length=543, Percent_Identity=34.0699815837937, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24586599, Length=569, Percent_Identity=33.0404217926186, Blast_Score=282, Evalue=6e-76,
Organism=Drosophila melanogaster, GI24586591, Length=497, Percent_Identity=37.4245472837022, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI24583745, Length=521, Percent_Identity=33.9731285988484, Blast_Score=278, Evalue=6e-75,
Organism=Drosophila melanogaster, GI24586593, Length=545, Percent_Identity=34.4954128440367, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24583747, Length=523, Percent_Identity=34.7992351816444, Blast_Score=278, Evalue=8e-75,
Organism=Drosophila melanogaster, GI24583749, Length=523, Percent_Identity=34.7992351816444, Blast_Score=278, Evalue=9e-75,
Organism=Drosophila melanogaster, GI45549022, Length=530, Percent_Identity=33.7735849056604, Blast_Score=277, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24586589, Length=539, Percent_Identity=35.9925788497217, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24586587, Length=586, Percent_Identity=31.3993174061433, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI281360393, Length=488, Percent_Identity=31.9672131147541, Blast_Score=205, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 64726; Mature: 64595

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRNTDAHWWKTATIYQIYPKSFCDSGAKGTGDIQGIISKLEYLKHLGIDAIWLTPVYQ
CCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC
SPMVDNGYDISDYYRINPQFGTMADFDELLEKAHQLGIRLIMDIVVNHTSTEHAWFQSAL
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GNKNSPYRDYYIWKDPVEGKVPNNWQSKFGGSAWALDEQTGQYYLHLFAKEQADLNWENP
CCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCEEEEEEEHHCCCCCCCCC
TVREEVKNVIRFWAEKGVDGFRLDVINLISKQQDFCDDEIGDGRRFYTDGPRVHDYLQEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHH
SQAVFQKYGSVTVGEMSSTTLEHCQQYSSLDGKELSMVFNFHHLKVDYSNGEKWTKAPFD
HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHH
FLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGNDQVYRVESAKMLAASVHMMQG
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
TPYVYQGEEIGMTNPGYTAIEQYRDVESTNMYQIMVEQQGIDHDEMMAILAQKSRDNSRT
CCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
PMQWSEEKHAGFTQGEPWLAVASNYPKINAEAAVADLNSVFYFYKRLIELRKEEPVITQG
CCCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DYQDLLPEHQSVFAYARTSAAQQLVCINNYYGEEVECVLPLDLDMRKAKCLLSNYQNQPS
CHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCH
AMASHHQVLKPYETRILLIER
HHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
TTRNTDAHWWKTATIYQIYPKSFCDSGAKGTGDIQGIISKLEYLKHLGIDAIWLTPVYQ
CCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC
SPMVDNGYDISDYYRINPQFGTMADFDELLEKAHQLGIRLIMDIVVNHTSTEHAWFQSAL
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GNKNSPYRDYYIWKDPVEGKVPNNWQSKFGGSAWALDEQTGQYYLHLFAKEQADLNWENP
CCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCEEEEEEEHHCCCCCCCCC
TVREEVKNVIRFWAEKGVDGFRLDVINLISKQQDFCDDEIGDGRRFYTDGPRVHDYLQEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHH
SQAVFQKYGSVTVGEMSSTTLEHCQQYSSLDGKELSMVFNFHHLKVDYSNGEKWTKAPFD
HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHH
FLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGNDQVYRVESAKMLAASVHMMQG
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
TPYVYQGEEIGMTNPGYTAIEQYRDVESTNMYQIMVEQQGIDHDEMMAILAQKSRDNSRT
CCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
PMQWSEEKHAGFTQGEPWLAVASNYPKINAEAAVADLNSVFYFYKRLIELRKEEPVITQG
CCCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DYQDLLPEHQSVFAYARTSAAQQLVCINNYYGEEVECVLPLDLDMRKAKCLLSNYQNQPS
CHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCH
AMASHHQVLKPYETRILLIER
HHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]