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The map label for this gene is recJ [H]

Identifier: 161501843

GI number: 161501843

Start: 528519

End: 530258

Strand: Reverse

Name: recJ [H]

Synonym: VV1_0528

Alternate gene names: 161501843

Gene position: 530258-528519 (Counterclockwise)

Preceding gene: 326423727

Following gene: 27363990

Centisome position: 16.16

GC content: 50.92

Gene sequence:

>1740_bases
ATGATAGAAATACAACGACGACCAGAACCCGATCTTTCCCTCTTGCCCGACAGTGTGCCGGATATCCTCAAACGCATCTA
TCTCAACCGTGGTATTCAAGACATAAGCCAGTTGGAAACTGCCGTCAAAGGGTTGCATTCATACCAAAAACTGCACGGAA
TTGAACTTGCCGTTGAGCTGCTTTTTGAGGCTATACGTGAGCAGAAGCGAATTATTGTGGTCGGGGATTTTGATGCCGAT
GGCGCGACCAGTTCGGCACTCTCAGTGCTTGCCCTGCGCATGCTTGGCAGCAACAATGTCGACTACTTAGTGCCCAACCG
CTTTGAAGATGGCTATGGTTTGAGCCCTGAAGTGGTCGAGCAGGCTATCGCCTTGGGCGCTGAAGTGATCATGACCGTGG
ATAACGGCGTCTCCTCCATTGAAGGGGTGCGTTATGCCAAAGAGCATGGCTTAAAAGTGTTGGTGACCGATCACCATTTG
CCCGGGCAAGTGTTGCCTGAGGTAGATGCGATGGTCAATCCAAACTTACAGACCTGCGCTTTTCCTTCCAAAGCACTGGC
TGGGGTTGGCGTGGCTTTTTATCTGATGATGGCCTTGTGTGTCCACATGCGTAAATGCGGTTGGTTTGCCGAGCAAGGTA
TGGCAGAGCCGAAGCTGATGGAGCTGGTGGATTTGGTGGCCTTAGGCACCGTTGCGGATGTTGTTCCGCTGGATGAGAAC
AACCGCATTTTGGTGCACCAGGGCCTGCAGCGCATTCGCGCCGGGAAAGCGCGTCCGGGTATTCAAGCCTTGATTGAAGT
GGCCAAGCGCGATGCTCGTCGTTTGGTGGCGGCAGATTTCGGTTTTGCACTGGGCCCGCGCATCAATGCCGCAGGGCGTC
TGGATGACATGTCGTTTGGGGTTGAATTGCTGATGTGCAACAACATCCACGCGGCGCGTCGTATGGCGCATGAACTGGAC
GGGCTCAATCAAACTCGTAAAGAAATTGAAGAGGGCATGAAGCAAGAGGCAATGGCGTTTTGTGAACGTCTGCAGTTTGG
CGAAAACAGCGAGTTGCCTTATGGTTTGGCTCTTTTCCAGCGTGATTGGCATCAGGGCGTGATTGGCATTCTAGCGTCGA
GAATCAAAGAGAAATATCATCGTCCGGTGATTGCATTTGCCGATGGTGGCGATGGGTATATCAAAGGATCCTGTCGCTCT
ATTCCTGGCCTACACATGCGCGATGCGCTGGACTTGATTGACACACAAAATCCCGGCTTGATCCTCAAATTTGGTGGTCA
TGCGATGGCGGCTGGCTTGACCATCAAAGAGTGCGATTTTGAACGATTTAGTCAGCTGTTTGATCAACTGGTGAAACGCG
AATTGGATGAAGCCGCACTGAAAGGTATTGTGCTTTCTGATGGCGAACTCAAGCCTGAAGAGTTTTCTATGCATACTGCG
GAGCTGCTGCGATCTGCGGGGCCTTGGGGGCAGGCATTTCCAGAGCCCATTTTTGATGGCGAATTTAAAGTGCTACACCA
GAAATTGGTCGGCGAAAAACATCTAAAATTGATGCTTGAGCCTCTATTCAAAGGTCATCCAACCAACATCATGATTGACG
GGATCGCCTTCAACGTCGATTTACGTCGCTGGCCAGATGCCTCGGTGAAAACCGTTCGCCTTGCCTACAAACTGGATATC
AATGAGTTTCGCAACAATCAATCGTTGCAATTGATGATTGAACACATCGAAGCTCGATAA

Upstream 100 bases:

>100_bases
TGGTTACTTGCCACCAGAAAAACTGCTAGAGCGCTTACAGCAACAATAAACCTTCAAGGAGCAGAGCCTGCGCGTCTGAC
CCGCGGGCTCTATTCAATTA

Downstream 100 bases:

>100_bases
CCGTCATTAAAGGAGTGAGAACGAATCTCGCTCCTTTTTTCTCTTCAGGATTCGGCAAATTTCTTCCCAATTTTTCCTGT
ATCTCTGTCACATTTTTGAG

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVELLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRKCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGHPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR

Sequences:

>Translated_579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVELLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRKCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGHPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR
>Mature_579_residues
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVELLFEAIREQKRIIVVGDFDAD
GATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVEQAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHL
PGQVLPEVDAMVNPNLQTCAFPSKALAGVGVAFYLMMALCVHMRKCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVELLMCNNIHAARRMAHELD
GLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQRDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRS
IPGLHMRDALDLIDTQNPGLILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGHPTNIMIDGIAFNVDLRRWPDASVKTVRLAYKLDI
NEFRNNQSLQLMIEHIEAR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=575, Percent_Identity=62.7826086956522, Blast_Score=743, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64356; Mature: 64356

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVEL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFEAIREQKRIIVVGDFDADGATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVE
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHLPGQVLPEVDAMVNPNLQTCA
HHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCHHCC
FPSKALAGVGVAFYLMMALCVHMRKCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
VELLMCNNIHAARRMAHELDGLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQ
EEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRSIPGLHMRDALDLIDTQNPGL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCE
ILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGHPTNIMIDGIAFNVD
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEEEE
LRRWPDASVKTVRLAYKLDINEFRNNQSLQLMIEHIEAR
CCCCCCCCCEEEEEEEEEEHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIEIQRRPEPDLSLLPDSVPDILKRIYLNRGIQDISQLETAVKGLHSYQKLHGIELAVEL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFEAIREQKRIIVVGDFDADGATSSALSVLALRMLGSNNVDYLVPNRFEDGYGLSPEVVE
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAIALGAEVIMTVDNGVSSIEGVRYAKEHGLKVLVTDHHLPGQVLPEVDAMVNPNLQTCA
HHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCHHCC
FPSKALAGVGVAFYLMMALCVHMRKCGWFAEQGMAEPKLMELVDLVALGTVADVVPLDEN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCC
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
VELLMCNNIHAARRMAHELDGLNQTRKEIEEGMKQEAMAFCERLQFGENSELPYGLALFQ
EEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RDWHQGVIGILASRIKEKYHRPVIAFADGGDGYIKGSCRSIPGLHMRDALDLIDTQNPGL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCE
ILKFGGHAMAAGLTIKECDFERFSQLFDQLVKRELDEAALKGIVLSDGELKPEEFSMHTA
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
ELLRSAGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLFKGHPTNIMIDGIAFNVD
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEEEE
LRRWPDASVKTVRLAYKLDINEFRNNQSLQLMIEHIEAR
CCCCCCCCCEEEEEEEEEEHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]