Click here to switch to the map view.

The map label for this gene is yaeJ [C]

Identifier: 23502936

GI number: 23502936

Start: 2010497

End: 2011033

Strand: Reverse

Name: yaeJ [C]

Synonym: BR2088

Alternate gene names: 23502936

Gene position: 2011033-2010497 (Counterclockwise)

Preceding gene: 23502937

Following gene: 23502928

Centisome position: 95.41

GC content: 58.85

Gene sequence:

>537_bases
TTGAGGAGGGGGGAAGCCCGGGCCATCGCGCGGGGCTTCTTTTTTTGGCTGTTATCGCAAGAATTTCGCAGGGCGCCAAA
TCAGTGTATGGGTTCTCTCATGCAAGAGGATCGCAACATCATCCGCATAACCAGGCGCCTGTCGATCCACGAGGACGATC
TGGAGGAAGCGTTTATCCGCGCATCCGGCCCCGGCGGGCAGAATGTCAACAAGGTTTCGACCGCTGTGCAATTGCGCTTT
CATGCCGCGCGATCCGGTCTGCCGGAAGATATTCTGTCACGGCTTTTCAAGCTGGCCGGACAGAAAGGCACAAAGGACGG
CGATATCCTGATTGAAGCCAATCGCTTCCGCACGCAGGAGCGCAATCGCGAGGACGCCCGCGAACGCCTTCTTGCGCTGA
TCGCCAAGGCAGCCGAACCGCCGCCCCCGCCACGCAAGAAGACCAAACCATCCAGAGGTGCGGTCGAGCGCCGCCTGAAG
GCAAAATCCGGCCGCTCCGAGATCAAAAAAGGACGCGGCAAGGTTTCTTTTGATTAG

Upstream 100 bases:

>100_bases
GTTCGTTTCCAACTTCGAGAAGTTTGAAAGCCACGTCGACCACGAGGTCAAGGATGCCGCACCGGCGATCCGCATGGCTG
CTGAATAGGTTTTAAGCATA

Downstream 100 bases:

>100_bases
GCTGTAATGACCCGGAAGCGGGAACCGGTTTTGCATCCGGTCATGGGGAAAGAATGCTCGCGTCAGATTTTCCTGAGAGC
CACTTCCTCAATCAGATGAT

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRRGEARAIARGFFFWLLSQEFRRAPNQCMGSLMQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRF
HAARSGLPEDILSRLFKLAGQKGTKDGDILIEANRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLK
AKSGRSEIKKGRGKVSFD

Sequences:

>Translated_178_residues
MRRGEARAIARGFFFWLLSQEFRRAPNQCMGSLMQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRF
HAARSGLPEDILSRLFKLAGQKGTKDGDILIEANRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLK
AKSGRSEIKKGRGKVSFD
>Mature_178_residues
MRRGEARAIARGFFFWLLSQEFRRAPNQCMGSLMQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRF
HAARSGLPEDILSRLFKLAGQKGTKDGDILIEANRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLK
AKSGRSEIKKGRGKVSFD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=136, Percent_Identity=44.1176470588235, Blast_Score=103, Evalue=7e-24,
Organism=Drosophila melanogaster, GI19921098, Length=131, Percent_Identity=38.1679389312977, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 20191; Mature: 20191

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGEARAIARGFFFWLLSQEFRRAPNQCMGSLMQEDRNIIRITRRLSIHEDDLEEAFIR
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRLFKLAGQKGTKDGDILIEANRFRTQE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
RNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLKAKSGRSEIKKGRGKVSFD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRGEARAIARGFFFWLLSQEFRRAPNQCMGSLMQEDRNIIRITRRLSIHEDDLEEAFIR
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRLFKLAGQKGTKDGDILIEANRFRTQE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
RNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLKAKSGRSEIKKGRGKVSFD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]