Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 23502292

GI number: 23502292

Start: 1376077

End: 1377756

Strand: Reverse

Name: recN [H]

Synonym: BR1421

Alternate gene names: 23502292

Gene position: 1377756-1376077 (Counterclockwise)

Preceding gene: 23502293

Following gene: 23502291

Centisome position: 65.36

GC content: 62.26

Gene sequence:

>1680_bases
ATGCTGTCGCACCTGTCGATCCGCGATATTGTTCTGATTGAAAGGCTCGACATCGTGTTCAGGAGCGGCTTGTCCGTGCT
TACGGGTGAAACCGGTGCGGGTAAGTCCATTCTGCTCGATTCGCTGTCGCTGGCGCTTGGTGCGCGTGGTGATGCCTCGC
TTGTGCGCCATGGTGCCGATCAGGGACAGGTAACGGCGGTTTTCGATGTGCCGGGCAATCATCCAGCCCGGCTTTTTCTG
CGCGAAAACGGGTTTGACGATGATGGTGACATCATCCTGCGCCGCCTCCAGATGGGGGACGGGCGCACGCGTGTCTTCAT
CAATGATCAGGCGGCAAGCGTTGCGCTCCTGCGCGATCTGGGCAAGAGGCTCGTAGAAATTCATGGCCAGCATGATGACC
GCGCGCTGATCGACACCGATCTGCACCGCACACTTCTCGACGCTTTCGGCGGGCTTGACGCACAGGCGATGCTGGTGCGC
GAACGCCACAAGGCGTGGCGTGATGCGGAAAGCGCGCTTGCAAAGCACCGCGCCCGCGTGGAGCAGGCCGAGCGTGAGGG
CGATTATCTGCGTTCCTCGGTGGAGGAGCTGACCAAGCTTGATCCGCAGCCGGGCGAGGAGGAGGAACTTGCAGAACGCC
GCGCGACGATGATGAAATCGGAAAAGATCGCTGGCGATGTCAATGAGGCAGGCGAGCTTCTTTCCGGCCAGGGATCGCCC
GTGCCGTCGCTTGCAAGCCTGGTGCGCCGTCTGGAGCGCAAGGCCATTGAAGCGCCCCATCTGCTGGAGCCGGTTTGCAA
GGCGATAGACGAGGCGCTGGACAGTCTGGCGCGGGCGCAGGACGGTATCGACCACGCCATGCGCGAGATCGATTTTGATC
CGCGTGTGCTGGAGCAGGTGGAAGAACGCCTGTTCGCCCTGCGTGCGGCGGCGCGCAAATATTCCGTCTCTGTGGAAGGT
TTGCCTGCGCTGCGTGACAAGATGGATGCCGATCTGGCCGATCTCGATGCAGGGGCGGAAAAGCTGATCCAGCTTGAAGC
CCATGCGGGCGAAATGCGGGCTGCCTATGACGAGGCTGCGGCGCAGTTGTCAGCCGCGCGCAAGGAAACGGCTGGCCATC
TCAAGGCTGCTGTTATGGCGGAACTGCCCGCGCTGAAGCTTGAGCGCGCTGAATTCATCGTTGAAATGACCACCGATCCG
CAAACGAGGACGGCGGAAGGCATCGACACGGTGGAATATTGGGTGCGAACAAATCCGGGCACGCGGGCAGGGCCGATGAT
GAAGGTTGCCTCTGGCGGTGAACTTTCGCGTTTCCTTCTGGCGCTTAAAGTGGCGCTTGCCGATCGCGGTTCCGCACCGA
CTTTGGTGTTTGATGAAATCGATACCGGCGTGGGCGGCGCGGTGGCGGATGCGATCGGGCAACGTCTGGCGCGTCTTTCC
GGCCGGGTGCAGGTGCTCTCCGTCACCCATGCGCCGCAGGTGGCGGCGCGCGCTTCCACCCATTTCCTGATCGCCAAATC
CGCGACCCACGAGGACCGTATGGCGACTTCCATCCGTGTCATGGCAACGGATGAGCGGCAGGAGGAAATTGCGCGTATGC
TGGCTGGCGCCAGCATCACCGATGAGGCGCGCGCGGCAGCCGAACGCCTTCTGGCTGAAAATGGCGCGCCCGCATCCTGA

Upstream 100 bases:

>100_bases
CTTGCAGAGCGGCGGTCTTCAGCCGCGCGAAAATGGCAATTCGTGGCTGGCCAAGGCTGGGGCGCTCATCACCGGCGGCA
GCTCATAAGCTGATCCCGAC

Downstream 100 bases:

>100_bases
CAACTCCCTGGCAGCATGCCTTGTTCGTAAAGGATGGCGCCAGTAGGCGGGAGCGCATTTCTTGGTTATGTTGCAGCCGA
TTCAAGATAGTCAGGATTTG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGADQGQVTAVFDVPGNHPARLFL
RENGFDDDGDIILRRLQMGDGRTRVFINDQAASVALLRDLGKRLVEIHGQHDDRALIDTDLHRTLLDAFGGLDAQAMLVR
ERHKAWRDAESALAKHRARVEQAEREGDYLRSSVEELTKLDPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSP
VPSLASLVRRLERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQVEERLFALRAAARKYSVSVEG
LPALRDKMDADLADLDAGAEKLIQLEAHAGEMRAAYDEAAAQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDP
QTRTAEGIDTVEYWVRTNPGTRAGPMMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
GRVQVLSVTHAPQVAARASTHFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASITDEARAAAERLLAENGAPAS

Sequences:

>Translated_559_residues
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGADQGQVTAVFDVPGNHPARLFL
RENGFDDDGDIILRRLQMGDGRTRVFINDQAASVALLRDLGKRLVEIHGQHDDRALIDTDLHRTLLDAFGGLDAQAMLVR
ERHKAWRDAESALAKHRARVEQAEREGDYLRSSVEELTKLDPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSP
VPSLASLVRRLERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQVEERLFALRAAARKYSVSVEG
LPALRDKMDADLADLDAGAEKLIQLEAHAGEMRAAYDEAAAQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDP
QTRTAEGIDTVEYWVRTNPGTRAGPMMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
GRVQVLSVTHAPQVAARASTHFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASITDEARAAAERLLAENGAPAS
>Mature_559_residues
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGADQGQVTAVFDVPGNHPARLFL
RENGFDDDGDIILRRLQMGDGRTRVFINDQAASVALLRDLGKRLVEIHGQHDDRALIDTDLHRTLLDAFGGLDAQAMLVR
ERHKAWRDAESALAKHRARVEQAEREGDYLRSSVEELTKLDPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSP
VPSLASLVRRLERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQVEERLFALRAAARKYSVSVEG
LPALRDKMDADLADLDAGAEKLIQLEAHAGEMRAAYDEAAAQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDP
QTRTAEGIDTVEYWVRTNPGTRAGPMMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
GRVQVLSVTHAPQVAARASTHFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASITDEARAAAERLLAENGAPAS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=32.9113924050633, Blast_Score=295, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60544; Mature: 60544

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAD
CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFDVPGNHPARLFLRENGFDDDGDIILRRLQMGDGRTRVFINDQAASVALLRDL
CCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
GKRLVEIHGQHDDRALIDTDLHRTLLDAFGGLDAQAMLVRERHKAWRDAESALAKHRARV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAEREGDYLRSSVEELTKLDPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
VPSLASLVRRLERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLFALRAAARKYSVSVEGLPALRDKMDADLADLDAGAEKLIQLEAHAGEMRAAYDEAA
HHHHHHHHHHHHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHEEHHHCCCHHHHHHHHHH
AQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDPQTRTAEGIDTVEYWVRTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHEECCCC
TRAGPMMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
GRVQVLSVTHAPQVAARASTHFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASIT
CCEEEEEECCCCHHHHHCCCEEEEEECCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCC
DEARAAAERLLAENGAPAS
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARGDASLVRHGAD
CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGQVTAVFDVPGNHPARLFLRENGFDDDGDIILRRLQMGDGRTRVFINDQAASVALLRDL
CCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
GKRLVEIHGQHDDRALIDTDLHRTLLDAFGGLDAQAMLVRERHKAWRDAESALAKHRARV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAEREGDYLRSSVEELTKLDPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
VPSLASLVRRLERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLFALRAAARKYSVSVEGLPALRDKMDADLADLDAGAEKLIQLEAHAGEMRAAYDEAA
HHHHHHHHHHHHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHEEHHHCCCHHHHHHHHHH
AQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDPQTRTAEGIDTVEYWVRTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHEECCCC
TRAGPMMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLARLS
CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
GRVQVLSVTHAPQVAARASTHFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASIT
CCEEEEEECCCCHHHHHCCCEEEEEECCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCC
DEARAAAERLLAENGAPAS
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA