Click here to switch to the map view.

The map label for this gene is 23502252

Identifier: 23502252

GI number: 23502252

Start: 1336511

End: 1337152

Strand: Reverse

Name: 23502252

Synonym: BR1381

Alternate gene names: NA

Gene position: 1337152-1336511 (Counterclockwise)

Preceding gene: 23502254

Following gene: 23502251

Centisome position: 63.44

GC content: 59.97

Gene sequence:

>642_bases
GTGACTGATACAGGCGACGAATTGCAGGCTCATAAGCAGCAGGTTCTTTCGCCGCGTCAGAACGATGTTCTGGAGCAGGC
GTTGCGCCTTCTGGTCGAGGGTGGGGACCGCGCTTTGACGACGGCGAGTATTGCGCGCGCGGCCAACTGCTCGAAAGAAA
GCCTCTACAAATGGTTTGGCGACCGCGATGGTCTGTTGACGGCGATGGTGCGCTGGCAGGCCTCGAAGGTCCGCGTGGTG
CCGCTGGCCCGCGAAAAACTCGATGCCGAATCCCTCTTTTCAAGCCTCGAACATTTTGCCCGCGACTGGCTGCTTGTGCT
TTCCGGGCGCACGTCGATCGCACTCAACCGGCTGGCCGTCAGCCATGCCGCGTCGGGCAGGTCGGCTCTGGGCGAGATCG
TTCTCTCCAATGGCCCTGTTGCCATGGCGGAGCGCCTGAAGCCCATCCTGACCATGGGTAAAGAGGCGGGTTTGCTCATT
TTCGACGATATCGATGAGGCATTTCGCACGTTTTTTGGACTGGTGGTTCGGGACATGCAAATCCGGTTGCTGCTTGGCGA
CCGGCTGAAATTGACTGACGAAGTGGTTATCCGGGATGCCCGGTGCGCCACGAAGCGGTTTTTCGCCCTTTACGGGGCCT
GA

Upstream 100 bases:

>100_bases
TGAATATGCGAAATTTCTGGAAAACATGCTTGACCGCTGGCAAAACAGAAATTAAAAATCAGGAACCGTACCGTACGGTA
CAAGGTGGAGGAAATGATAC

Downstream 100 bases:

>100_bases
GCTGACTGGCGGACGCAAGGACGCTGGCGAACAATTTGAATGAAGGGAATAGGAAATGCGCGTTTATTACGATCGGGATG
CAGACGTTAACCTGATCAAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANCSKESLYKWFGDRDGLLTAMVRWQASKVRVV
PLAREKLDAESLFSSLEHFARDWLLVLSGRTSIALNRLAVSHAASGRSALGEIVLSNGPVAMAERLKPILTMGKEAGLLI
FDDIDEAFRTFFGLVVRDMQIRLLLGDRLKLTDEVVIRDARCATKRFFALYGA

Sequences:

>Translated_213_residues
MTDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANCSKESLYKWFGDRDGLLTAMVRWQASKVRVV
PLAREKLDAESLFSSLEHFARDWLLVLSGRTSIALNRLAVSHAASGRSALGEIVLSNGPVAMAERLKPILTMGKEAGLLI
FDDIDEAFRTFFGLVVRDMQIRLLLGDRLKLTDEVVIRDARCATKRFFALYGA
>Mature_212_residues
TDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANCSKESLYKWFGDRDGLLTAMVRWQASKVRVVP
LAREKLDAESLFSSLEHFARDWLLVLSGRTSIALNRLAVSHAASGRSALGEIVLSNGPVAMAERLKPILTMGKEAGLLIF
DDIDEAFRTFFGLVVRDMQIRLLLGDRLKLTDEVVIRDARCATKRFFALYGA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23616; Mature: 23484

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANCSKESLYKWFG
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHC
DRDGLLTAMVRWQASKVRVVPLAREKLDAESLFSSLEHFARDWLLVLSGRTSIALNRLAV
CCCCHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH
SHAASGRSALGEIVLSNGPVAMAERLKPILTMGKEAGLLIFDDIDEAFRTFFGLVVRDMQ
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
IRLLLGDRLKLTDEVVIRDARCATKRFFALYGA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDTGDELQAHKQQVLSPRQNDVLEQALRLLVEGGDRALTTASIARAANCSKESLYKWFG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHC
DRDGLLTAMVRWQASKVRVVPLAREKLDAESLFSSLEHFARDWLLVLSGRTSIALNRLAV
CCCCHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH
SHAASGRSALGEIVLSNGPVAMAERLKPILTMGKEAGLLIFDDIDEAFRTFFGLVVRDMQ
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
IRLLLGDRLKLTDEVVIRDARCATKRFFALYGA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA