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The map label for this gene is yvrB [H]

Identifier: 23502217

GI number: 23502217

Start: 1305202

End: 1306203

Strand: Reverse

Name: yvrB [H]

Synonym: BR1345

Alternate gene names: 23502217

Gene position: 1306203-1305202 (Counterclockwise)

Preceding gene: 23502218

Following gene: 23502216

Centisome position: 61.97

GC content: 62.18

Gene sequence:

>1002_bases
GTGACTGAACGCCACCGTTTCCATCTTCTGCTGGCCGGGCTGGCCTTGCTCGTCATCGTGCTTTTTGCCGTTTCGCTTTT
GACAGGTCCAGCCGCGCTTGGCATAGGCGAAAGTTTCAAGGCACTTTTGGGCGATGATCGCGATATGACCGTGCTGGTGA
TGCGGGAAATCCGTCTGCCGCGCGCGCTGCTGGCGCTTTTGATCGGGGCTTCGCTCGGTCTTTCAGGGGCGGCGTTGCAA
GGCTATCTTCGCAATCCGCTTGCAGAACCGGGCCTGCTCGGTGTCAGTGCATCGGCGTCGCTCGGCGCCGTCATTGCGAT
CTATAGCGGGCTTTCGCTTCTGTTTCCGCTTGCCCTGCCGCTTCTGGCTCTCGCGGGGGCTTTCGTTTCGGTGTTTCTGG
TCAAACTTCTTGCAGGCCGCAATGCTGGCACGCTGGCGGTGATCCTGGCCGGTGTCGCTGTCACCAGCCTTGCAGGCGCG
CTGACGGCGCTGGCGCTCAATCTTTCGCCCAATCCCTTTGCGGCCATGGAAATCGTGTTCTGGATGCTGGGCTCGCTTGC
CGACCGTTCCATGACACATGTGGCGCTGGTTATACCGTTCATCCTCATCGGCTGGCTCATGCTTCTTTCGCTTGGCCGCT
CGCTCGACAGCCTTACGCTCGGTTCCGATGCGGCGGCGACAATGGGCGTCAGTCTGGGGCGCGTGCAGCTTTTTGCCGTT
CTTGGCACGGCGGCTTGTGTCGGGGCGTCAACGGCGGTTGCAGGCTCCATCGGTTTCGTGGGGCTTGTGGTGCCGCACCT
CCTGCGTCCGCTGGTTGGTGCGCGCCCCTCGCGCCTGCTCGTCGCGAGCGGCCTTGGCGGGGCCGCCCTGCTGCTTGCAG
CGGATATTCTGGTGCGTGTCGTCATGCCGGGGCGCGAACTGAAACTTGGCGTTCTGACAGCCATTATCGGCGCGCCATTC
TTCCTCTGGCTGGTGTTCAAATATCGGAGGCAGCTCGTATGA

Upstream 100 bases:

>100_bases
CTGGAAAAGCAGGCGCGGGCCATAAGCATGGCCGATAATCTTACGGTTTGCGGTGGACCTTTCAGCGTCGAGGCCGTGGC
GGAGCTTGCGGAGGCTGCCC

Downstream 100 bases:

>100_bases
CCTTGCTTTCGGTGAAAAACCTCGACGTGATCCTTGGCGGCAAGCGTGCCCTGGCCGATGCCAGCTTCGAGACAAAGGGC
GGCGAATTCATCGGCCTTGT

Product: iron compound ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTERHRFHLLLAGLALLVIVLFAVSLLTGPAALGIGESFKALLGDDRDMTVLVMREIRLPRALLALLIGASLGLSGAALQ
GYLRNPLAEPGLLGVSASASLGAVIAIYSGLSLLFPLALPLLALAGAFVSVFLVKLLAGRNAGTLAVILAGVAVTSLAGA
LTALALNLSPNPFAAMEIVFWMLGSLADRSMTHVALVIPFILIGWLMLLSLGRSLDSLTLGSDAAATMGVSLGRVQLFAV
LGTAACVGASTAVAGSIGFVGLVVPHLLRPLVGARPSRLLVASGLGGAALLLAADILVRVVMPGRELKLGVLTAIIGAPF
FLWLVFKYRRQLV

Sequences:

>Translated_333_residues
MTERHRFHLLLAGLALLVIVLFAVSLLTGPAALGIGESFKALLGDDRDMTVLVMREIRLPRALLALLIGASLGLSGAALQ
GYLRNPLAEPGLLGVSASASLGAVIAIYSGLSLLFPLALPLLALAGAFVSVFLVKLLAGRNAGTLAVILAGVAVTSLAGA
LTALALNLSPNPFAAMEIVFWMLGSLADRSMTHVALVIPFILIGWLMLLSLGRSLDSLTLGSDAAATMGVSLGRVQLFAV
LGTAACVGASTAVAGSIGFVGLVVPHLLRPLVGARPSRLLVASGLGGAALLLAADILVRVVMPGRELKLGVLTAIIGAPF
FLWLVFKYRRQLV
>Mature_332_residues
TERHRFHLLLAGLALLVIVLFAVSLLTGPAALGIGESFKALLGDDRDMTVLVMREIRLPRALLALLIGASLGLSGAALQG
YLRNPLAEPGLLGVSASASLGAVIAIYSGLSLLFPLALPLLALAGAFVSVFLVKLLAGRNAGTLAVILAGVAVTSLAGAL
TALALNLSPNPFAAMEIVFWMLGSLADRSMTHVALVIPFILIGWLMLLSLGRSLDSLTLGSDAAATMGVSLGRVQLFAVL
GTAACVGASTAVAGSIGFVGLVVPHLLRPLVGARPSRLLVASGLGGAALLLAADILVRVVMPGRELKLGVLTAIIGAPFF
LWLVFKYRRQLV

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=301, Percent_Identity=41.8604651162791, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=38.9067524115756, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788004, Length=283, Percent_Identity=40.6360424028269, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1790741, Length=322, Percent_Identity=36.0248447204969, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786804, Length=312, Percent_Identity=35.2564102564103, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786347, Length=331, Percent_Identity=31.1178247734139, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34245; Mature: 34114

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERHRFHLLLAGLALLVIVLFAVSLLTGPAALGIGESFKALLGDDRDMTVLVMREIRLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHCCH
RALLALLIGASLGLSGAALQGYLRNPLAEPGLLGVSASASLGAVIAIYSGLSLLFPLALP
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLALAGAFVSVFLVKLLAGRNAGTLAVILAGVAVTSLAGALTALALNLSPNPFAAMEIVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
WMLGSLADRSMTHVALVIPFILIGWLMLLSLGRSLDSLTLGSDAAATMGVSLGRVQLFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGTAACVGASTAVAGSIGFVGLVVPHLLRPLVGARPSRLLVASGLGGAALLLAADILVRV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHH
VMPGRELKLGVLTAIIGAPFFLWLVFKYRRQLV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TERHRFHLLLAGLALLVIVLFAVSLLTGPAALGIGESFKALLGDDRDMTVLVMREIRLP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHCCH
RALLALLIGASLGLSGAALQGYLRNPLAEPGLLGVSASASLGAVIAIYSGLSLLFPLALP
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLALAGAFVSVFLVKLLAGRNAGTLAVILAGVAVTSLAGALTALALNLSPNPFAAMEIVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
WMLGSLADRSMTHVALVIPFILIGWLMLLSLGRSLDSLTLGSDAAATMGVSLGRVQLFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGTAACVGASTAVAGSIGFVGLVVPHLLRPLVGARPSRLLVASGLGGAALLLAADILVRV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHH
VMPGRELKLGVLTAIIGAPFFLWLVFKYRRQLV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]