| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23502218
Identifier: 23502218
GI number: 23502218
Start: 1306196
End: 1307035
Strand: Reverse
Name: 23502218
Synonym: BR1346
Alternate gene names: NA
Gene position: 1307035-1306196 (Counterclockwise)
Preceding gene: 23502219
Following gene: 23502217
Centisome position: 62.01
GC content: 60.6
Gene sequence:
>840_bases GTGAAAAGGGTTTCCGTAAAATGGACGAGGAGGCTCTGCCTTGCGGCAGGTCTGGCCCTTTTTGCCCCCCTGCCGGCCAA TGCGGCTGATATTGCGCAGCGTGTGGTGTCGATCAATGTCTGCACCGATCAACTGGCCATGCTCCTGGCGCGGGAAGGGC AGTTGCAATCCGTCTCCTATCTCTCGCGTGATCCGCAGCTTTCCGTCATGGCGGACAAGGCCGAACGATTGCCGATCAAT CATGCGCAGGCTGAGGAGGTCTTTCTGCAAAAGCCGGACCTCGTGCTTGCAGGCACATTTTCCTCGCGCGCGACAGTCGG ATTGTTGCGCAGGCTCGGCATAAGGGTGGAGGAGTTTGCGCCCGCCCGTTCCTTCGAGGACATTCAAGAACATCTGCGCC GCATAGGCGAGCTTCTCGGGCGGCAGGCCGAAGCACAAGCGCAGATCGACGATATGAAGGCTGCGCTTGCTGCGATCAAA CGTCCCGATCATGCCAAGAGGGTCGCGCTTTACTACGCCAACAGCTATACGTCGGGCCAGGGTACGCTGGTCGATGAGGC CGTGCGGCTTGCGGGGCTTGAAAACATGGCTGGCGAGATCGGCATAACCGGCTCGGCGCTTCTGCCGCTGGAGAAACTGG TGCTTGAAAAGCCGGATATTCTGGTGCGCAGTTCGCGTGACCGCGCGCCCGCGCTGGCATTTGAAAATTTCCAGCACCCG GCTCTGCGCGCGCTGGAAAAGCAGGCGCGGGCCATAAGCATGGCCGATAATCTTACGGTTTGCGGTGGACCTTTCAGCGT CGAGGCCGTGGCGGAGCTTGCGGAGGCTGCCCGTGACTGA
Upstream 100 bases:
>100_bases AATATCTTCGACAAGGATTACGAGACGAGTTCCGGCTATGTTGCGCCGGGCCGCACCATCACTATCGGGCTGACCCGTAA TTTCTGAGATTGGACAGGAT
Downstream 100 bases:
>100_bases ACGCCACCGTTTCCATCTTCTGCTGGCCGGGCTGGCCTTGCTCGTCATCGTGCTTTTTGCCGTTTCGCTTTTGACAGGTC CAGCCGCGCTTGGCATAGGC
Product: iron compound ABC transporter periplasmic iron compound-binding protein
Products: NA
Alternate protein names: Ferrichrome ABC Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKRVSVKWTRRLCLAAGLALFAPLPANAADIAQRVVSINVCTDQLAMLLAREGQLQSVSYLSRDPQLSVMADKAERLPIN HAQAEEVFLQKPDLVLAGTFSSRATVGLLRRLGIRVEEFAPARSFEDIQEHLRRIGELLGRQAEAQAQIDDMKAALAAIK RPDHAKRVALYYANSYTSGQGTLVDEAVRLAGLENMAGEIGITGSALLPLEKLVLEKPDILVRSSRDRAPALAFENFQHP ALRALEKQARAISMADNLTVCGGPFSVEAVAELAEAARD
Sequences:
>Translated_279_residues MKRVSVKWTRRLCLAAGLALFAPLPANAADIAQRVVSINVCTDQLAMLLAREGQLQSVSYLSRDPQLSVMADKAERLPIN HAQAEEVFLQKPDLVLAGTFSSRATVGLLRRLGIRVEEFAPARSFEDIQEHLRRIGELLGRQAEAQAQIDDMKAALAAIK RPDHAKRVALYYANSYTSGQGTLVDEAVRLAGLENMAGEIGITGSALLPLEKLVLEKPDILVRSSRDRAPALAFENFQHP ALRALEKQARAISMADNLTVCGGPFSVEAVAELAEAARD >Mature_279_residues MKRVSVKWTRRLCLAAGLALFAPLPANAADIAQRVVSINVCTDQLAMLLAREGQLQSVSYLSRDPQLSVMADKAERLPIN HAQAEEVFLQKPDLVLAGTFSSRATVGLLRRLGIRVEEFAPARSFEDIQEHLRRIGELLGRQAEAQAQIDDMKAALAAIK RPDHAKRVALYYANSYTSGQGTLVDEAVRLAGLENMAGEIGITGSALLPLEKLVLEKPDILVRSSRDRAPALAFENFQHP ALRALEKQARAISMADNLTVCGGPFSVEAVAELAEAARD
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30346; Mature: 30346
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVSVKWTRRLCLAAGLALFAPLPANAADIAQRVVSINVCTDQLAMLLAREGQLQSVSY CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LSRDPQLSVMADKAERLPINHAQAEEVFLQKPDLVLAGTFSSRATVGLLRRLGIRVEEFA HCCCCCEEEEHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHC PARSFEDIQEHLRRIGELLGRQAEAQAQIDDMKAALAAIKRPDHAKRVALYYANSYTSGQ CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCC GTLVDEAVRLAGLENMAGEIGITGSALLPLEKLVLEKPDILVRSSRDRAPALAFENFQHP CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCH ALRALEKQARAISMADNLTVCGGPFSVEAVAELAEAARD HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKRVSVKWTRRLCLAAGLALFAPLPANAADIAQRVVSINVCTDQLAMLLAREGQLQSVSY CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LSRDPQLSVMADKAERLPINHAQAEEVFLQKPDLVLAGTFSSRATVGLLRRLGIRVEEFA HCCCCCEEEEHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHC PARSFEDIQEHLRRIGELLGRQAEAQAQIDDMKAALAAIKRPDHAKRVALYYANSYTSGQ CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCC GTLVDEAVRLAGLENMAGEIGITGSALLPLEKLVLEKPDILVRSSRDRAPALAFENFQHP CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCH ALRALEKQARAISMADNLTVCGGPFSVEAVAELAEAARD HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA