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The map label for this gene is fucU [H]

Identifier: 23502209

GI number: 23502209

Start: 1298462

End: 1298884

Strand: Reverse

Name: fucU [H]

Synonym: BR1337

Alternate gene names: 23502209

Gene position: 1298884-1298462 (Counterclockwise)

Preceding gene: 23502210

Following gene: 23502205

Centisome position: 61.62

GC content: 54.37

Gene sequence:

>423_bases
ATGCTCAAAAACATAAATCCTCTGCTTACAGGTTCGTTGCTCGCCATTCTCGCAGATATGGGCCATGGCGACGACCTCGT
CATCGTGGATGCAAATTATCCGGCGCAGGCTGCCGGTGTTCCCGTTCTCGATTTTCCGGGCATCAGTGCGACGCAAGTCG
CAGAAGCCGTGCTCTCCCTGCTGCCATTGGACGACTTTGTTGACAGGCCAGCAGCCGTGATGCAGGCGCCGAACGAAATG
CCTGCAATCTTCAAGGAATTTGAAGCGGTTATCGAGAAGGCTGAAGGCCGGAAGATTCCTGTCGAGCCGATTGAGCGATT
TGCCTTCTATGATCGCGCACGCGGGGCCTTCGCGATTATTCGCACCGGCGAAAAGCGGCTTTACGGCAATATTATTTTCA
AAAAGGGCGTGATCCGCTCCTGA

Upstream 100 bases:

>100_bases
GCTTTGAACACTTGGCGATAGCGATTTTCCTTATTTGCATATCGGGGCCGCCTTGCGATAGGCTCGTACCGATAGATCAT
CGCTCTTTGGAAAAGAATTC

Downstream 100 bases:

>100_bases
GCGGTTTGCTGGGGCGGTTTCGGTTAAACCCGAGCGTCTGATTGGGTTTGGCCCCTAAAGCCGCTCCATTCCCATTGAAG
CGCGTTTTTAAAAGAAACCC

Product: fucose operon fucU protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKNINPLLTGSLLAILADMGHGDDLVIVDANYPAQAAGVPVLDFPGISATQVAEAVLSLLPLDDFVDRPAAVMQAPNEM
PAIFKEFEAVIEKAEGRKIPVEPIERFAFYDRARGAFAIIRTGEKRLYGNIIFKKGVIRS

Sequences:

>Translated_140_residues
MLKNINPLLTGSLLAILADMGHGDDLVIVDANYPAQAAGVPVLDFPGISATQVAEAVLSLLPLDDFVDRPAAVMQAPNEM
PAIFKEFEAVIEKAEGRKIPVEPIERFAFYDRARGAFAIIRTGEKRLYGNIIFKKGVIRS
>Mature_140_residues
MLKNINPLLTGSLLAILADMGHGDDLVIVDANYPAQAAGVPVLDFPGISATQVAEAVLSLLPLDDFVDRPAAVMQAPNEM
PAIFKEFEAVIEKAEGRKIPVEPIERFAFYDRARGAFAIIRTGEKRLYGNIIFKKGVIRS

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=146, Percent_Identity=43.1506849315069, Blast_Score=111, Evalue=2e-25,
Organism=Homo sapiens, GI148596951, Length=131, Percent_Identity=41.2213740458015, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=41.4285714285714, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15223; Mature: 15223

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNINPLLTGSLLAILADMGHGDDLVIVDANYPAQAAGVPVLDFPGISATQVAEAVLSL
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCEEECCCCCHHHHHHHHHHH
LPLDDFVDRPAAVMQAPNEMPAIFKEFEAVIEKAEGRKIPVEPIERFAFYDRARGAFAII
CCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEE
RTGEKRLYGNIIFKKGVIRS
ECCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKNINPLLTGSLLAILADMGHGDDLVIVDANYPAQAAGVPVLDFPGISATQVAEAVLSL
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCEEECCCCCHHHHHHHHHHH
LPLDDFVDRPAAVMQAPNEMPAIFKEFEAVIEKAEGRKIPVEPIERFAFYDRARGAFAII
CCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEE
RTGEKRLYGNIIFKKGVIRS
ECCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA